RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 RTL3Q8N8U3 475 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 NPLQ9BXD5 320 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 REEP1Q9H902 201 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SLC13A4Q9UKG4 626 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PTGES3LE9PB15 166 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 HUS1O60921 280 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SPATA31C1P0DKV0 1188 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CREB5Q02930 508 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF404Q494X3 552 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 LCN8Q6JVE9 175 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PLD6Q8N2A8 252 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 NAT8LQ8N9F0 302 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 FTHL17Q9BXU8 183 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ZNRF3Q9ULT6 936 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 UBA6A0AVT1 1052 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 HNRNPCL2B2RXH8 293 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 IVDP26440 423 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PTBP1P26599 531 aaKnown RBP eCLIP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PLA2G4EQ3MJ16 856 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ANKLE1Q8NAG6 615 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ADAMTS16Q8TE57 1224 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 BAIAP2Q9UQB8 552 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 IPO13O94829 963 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF182P17025 639 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PPP3CCP48454 512 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 POU5F1BQ06416 359 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 RABL3Q5HYI8 236 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PNCKQ6P2M8 343 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 TFAP2DQ7Z6R9 452 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 FAM126BQ8IXS8 530 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 OFCC1Q8IZS5 231 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SNIP1Q8TAD8 396 aaKnown RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 TBC1D15Q8TC07 691 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 FGFBP2Q9BYJ0 223 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SERHL2Q9H4I8 314 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SERHLQ9NQF3 203 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 PMF1-BGLAPU3KQ54 211 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CHST10O43529 356 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 TRIP4Q15650 581 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ARHGAP17Q68EM7 881 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 SCARA5Q6ZMJ2 495 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 STK32CQ86UX6 486 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 CCDC185Q8N715 623 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ASB13Q8WXK3 278 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 NPAS2Q99743 824 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 KCNN2Q9H2S1 579 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 GSTK1Q9Y2Q3 226 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 NOX1Q9Y5S8 564 aa6.57□□□□□ -1.36
TRIM38-201ENST00000357085 MAGED1Q9Y5V3 778 aaPredicted RBP6.57□□□□□ -1.36
TRIM38-201ENST00000357085 ZFC3H1O60293 1989 aaKnown RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 HAT1O14929 419 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 MYL12BO14950 172 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 NBNO60934 754 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 OR7A10O76100 309 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 HCAR3P49019 387 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 BMXP51813 675 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PRKCEQ02156 737 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 CBLBQ13191 982 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 LRP8Q14114 963 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 STARD3Q14849 445 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 OXA1LQ15070 435 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PUS10Q3MIT2 529 aaKnown RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TAGAPQ8N103 731 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 FAM95CA0A1B0GW59 222 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 CYB561D2O14569 222 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ACOX3O15254 700 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SYNCRIPO60506 623 aaKnown RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 EEDO75530 441 aaKnown RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TGFB3P10600 412 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 IFI30P13284 250 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 CHRNB2P17787 502 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PSMA1P25786 263 aaKnown RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 MSX2P35548 267 aaPredicted RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PSMD8P48556 350 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 IMPG1Q17R60 797 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PGM2L1Q6PCE3 622 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 UTS2BQ765I0 119 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 VMP1Q96GC9 406 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 DMRTB1Q96MA1 342 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 CEP295NLQ96MC4 621 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SEPHS2Q99611 448 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 MYO1GB0I1T2 1018 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SUPT3HB4E1H0 165 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 M0QZ92 97 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 PRKACAP17612 351 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 KLHL17Q6TDP4 642 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF517Q6ZMY9 492 aaPredicted RBP6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TMEM161BQ8NDZ6 487 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 NR4A3Q92570 626 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TMEM246Q9BRR3 403 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ACTR6Q9GZN1 396 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 CNTN6Q9UQ52 1028 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 HS6ST1O60243 411 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SCN2BO60939 215 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 SULT1C4O75897 302 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 MIPP30301 263 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 ALDH3B2P48448 385 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 TAS2R40P59535 323 aa6.56□□□□□ -1.36
TRIM38-201ENST00000357085 NFIXQ14938 502 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms