RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ABI3BPQ7Z7G0 1075 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TTC7BQ86TV6 843 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 DCLK2Q8N568 766 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 MFSD2AQ8NA29 543 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TMEM145Q8NBT3 493 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PIH1D2Q8WWB5 315 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SERAC1Q96JX3 654 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 AGAP3Q96P47 875 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TRIB3Q96RU7 358 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 LYSMD1Q96S90 227 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SRPK1Q96SB4 655 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 NAP1L3Q99457 506 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CEP41Q9BYV8 373 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PCDH9Q9HC56 1237 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 AASDHPPTQ9NRN7 309 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 GPR27Q9NS67 375 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TRMT1Q9NXH9 659 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 GOLGA6AQ9NYA3 693 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SAE1Q9UBE0 346 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 FAM153AQ9UHL3 310 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 KLF15Q9UIH9 416 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TTC7AQ9ULT0 858 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 R3HDM2Q9Y2K5 976 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 HS3ST3A1Q9Y663 406 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TMEM131Q92545 1883 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TRIOO75962 3097 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 A0A0J9YYE9 177 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TCRBV7S2A1N4TA0A589 114 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 LNP1A1A4G5 178 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 C5orf60A6NFR6 353 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 IGLON5A6NGN9 336 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 USP27XA6NNY8 438 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PATE3B3GLJ2 98 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PGRMC1O00264 195 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CEP104O60308 925 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 DFNA5O60443 496 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ANXA9O76027 345 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TRBC1P01850 177 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ATP1A1P05023 1023 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 FGF1P05230 155 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF883P0CG24 379 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PRLRP16471 622 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TCP1P17987 556 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 HLA-DPA1P20036 260 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SDHBP21912 280 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 MAOBP27338 520 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 MAT2AP31153 395 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 IGFALSP35858 605 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CTSKP43235 329 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TNNT3P45378 269 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 RABIFP47224 123 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 EPHB1P54762 984 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 NXPH1P58417 271 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 BNC1Q01954 994 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SGCGQ13326 291 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 MTM1Q13496 603 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PRPSAP1Q14558 356 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 IRF4Q15306 451 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CCDC6Q16204 474 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CNGA3Q16281 694 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 P3H1Q32P28 736 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 LRRC73Q5JTD7 316 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ANKRD20A2Q5SQ80 823 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ANKRD20A1Q5TYW2 823 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ANKRD20A3Q5VUR7 823 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TCEAL6Q6IPX3 200 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 LIPIQ6XZB0 460 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 LRRC69Q6ZNQ3 347 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ARHGEF18Q6ZSZ5 1173 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 B4GALNT4Q76KP1 1039 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF765Q7L2R6 523 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PTAR1Q7Z6K3 402 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ADAT2Q7Z6V5 191 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 DCP2Q8IU60 420 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TP53I13Q8NBR0 393 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 LPCAT1Q8NF37 534 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PDCD6IPQ8WUM4 868 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TCEAL3Q969E4 200 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 LRRC45Q96CN5 670 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 COQ10AQ96MF6 247 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 RBM15Q96T37 977 aaKnown RBP eCLIP3.98□□□□□ -1.771e-6■■■□□ 16.9
CNOT4-202ENST00000356162 NAPGQ99747 312 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 WRAP53Q9BUR4 548 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ADGRE3Q9BY15 652 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SLC17A9Q9BYT1 436 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SMOC1Q9H4F8 434 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 EBF2Q9HAK2 575 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 USP29Q9HBJ7 922 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TMEM9BQ9NQ34 198 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 RAD18Q9NS91 495 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 HOMER3Q9NSC5 361 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TMEM74BQ9NUR3 256 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 NFKBIL1Q9UBC1 381 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 FEZ2Q9UHY8 353 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SNX12Q9UMY4 172 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CHKBQ9Y259 395 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 PCDHGB2Q9Y5G2 931 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 MYLKQ15746 1914 aa3.97□□□□□ -1.77
CNOT4-202ENST00000356162 ADAMTS9Q9P2N4 1935 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms