RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 HOXC4P09017 264 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 CYP2A6P11509 494 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 MYCLP1P12525 358 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 PECAM1P16284 738 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 AK4P27144 223 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 EIF2S3P41091 472 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 CD86P42081 329 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 DYNLT1P63172 113 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 CDK3Q00526 305 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 TCEAL1Q15170 157 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 ELOCQ15369 112 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 ZFYVE27Q5T4F4 411 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 TMPRSS9Q7Z410 1059 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 LRRC49Q8IUZ0 686 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 ARL10Q8N8L6 244 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 LPCAT1Q8NF37 534 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 TPCN2Q8NHX9 752 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 PATE1Q8WXA2 126 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 ASCL3Q9NQ33 180 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 SPATS2LQ9NUQ6 558 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 MOSPD1Q9UJG1 213 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 NBEAQ8NFP9 2946 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 CAPN8A6NHC0 703 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 KRT10P13645 584 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 ARHGAP25P42331 645 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 BLKP51451 505 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 STC1P52823 247 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 GABREP78334 506 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 CCL7P80098 99 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 IFI35P80217 286 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 QPCTQ16769 361 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 RAET1GQ6H3X3 334 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 TIGD7Q6NT04 549 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 OGFOD3Q6PK18 319 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 USP45Q70EL2 814 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 PDZD3Q86UT5 571 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 CNGA4Q8IV77 575 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 MAP7D3Q8IWC1 876 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 RHOT2Q8IXI1 618 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 SDR16C5Q8N3Y7 309 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 BBC3Q96PG8 261 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 DEPDC7Q96QD5 511 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 TRIB3Q96RU7 358 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 HERPUD2Q9BSE4 406 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 TRIM5Q9C035 493 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 SATB2Q9UPW6 733 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 TMEM98Q9Y2Y6 226 aa16.69■□□□□ 0.26
PDLIM7-201ENST00000355572 A0A1W2PQ67 120 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 GOLGA6CA6NDK9 693 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 GOLGA6BA6NDN3 693 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 B4DGG1 531 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 PSMD11O00231 422 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 APOL1O14791 398 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 TNFRSF10CO14798 259 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 LCA5LO95447 670 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 GOLGA6DP0CG33 693 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 CDKN2BP42772 138 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 MAZP56270 477 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 ARHGEF7Q14155 803 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 GALNT3Q14435 633 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 TAZQ16635 292 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 TBC1D25Q3MII6 688 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 C3orf38Q5JPI3 329 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 DOK6Q6PKX4 331 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 LVRNQ6Q4G3 990 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 TAF8Q7Z7C8 310 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 GKN2Q86XP6 184 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 RFX6Q8HWS3 928 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 SNIP1Q8TAD8 396 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 ABCG4Q9H172 646 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 SYNDIG1Q9H7V2 258 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 CARS2Q9HA77 564 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 PCDH9Q9HC56 1237 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 GOLGA6AQ9NYA3 693 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 ATXN7L1Q9ULK2 861 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 SUFUQ9UMX1 484 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 DOLKQ9UPQ8 538 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 REXO2Q9Y3B8 237 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 OAS3Q9Y6K5 1087 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 RNF215Q9Y6U7 377 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 PTPRQQ9UMZ3 2332 aa16.68■□□□□ 0.26
PDLIM7-201ENST00000355572 SOWAHDA6NJG2 315 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 FADS2P1A8MWK0 482 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 ZNF487B1APH4 448 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 AGRPO00253 132 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 TPM1P09493 284 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 PIRTP0C851 137 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 MAGEA1P43355 309 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 GNPDA1P46926 289 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 ZNF75DP51815 510 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 DPTQ07507 201 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 TSR1Q2NL82 804 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 KDELC2Q7Z4H8 507 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 FAM46DQ8NEK8 389 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 SPATA22Q8NHS9 363 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 GPBAR1Q8TDU6 330 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 KRT35Q92764 455 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 TADA1Q96BN2 335 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 NAF1Q96HR8 494 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms