RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ITGB7P26010 798 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 WASP42768 502 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 SEMG2Q02383 582 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 TFF2Q03403 129 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 GRSF1Q12849 480 aaKnown RBP eCLIP15.59■□□□□ 0.094e-6■■□□□ 12
CTSA-202ENST00000354880 TDGQ13569 410 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 FASTKD1Q53R41 847 aaKnown RBP15.59■□□□□ 0.09
CTSA-202ENST00000354880 GALNT7Q86SF2 657 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 KCNV2Q8TDN2 545 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 ALKBH8Q96BT7 664 aaKnown RBP15.59■□□□□ 0.09
CTSA-202ENST00000354880 PPP1R16AQ96I34 528 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 VPS39Q96JC1 886 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 KLF6Q99612 283 aaPredicted RBP15.59■□□□□ 0.09
CTSA-202ENST00000354880 CNOT10Q9H9A5 744 aaKnown RBP15.59■□□□□ 0.09
CTSA-202ENST00000354880 KCNK9Q9NPC2 374 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 PCDH12Q9NPG4 1184 aa15.59■□□□□ 0.09
CTSA-202ENST00000354880 FNDC3AQ9Y2H6 1198 aaKnown RBP15.59■□□□□ 0.09
CTSA-202ENST00000354880 CKAP5Q14008 2032 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 GOLGA8RI6L899 631 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 RFPL1O75677 317 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 SRFP11831 508 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 OGNP20774 298 aaKnown RBP15.58■□□□□ 0.08
CTSA-202ENST00000354880 LHCGRP22888 699 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 MC4RP32245 332 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 ABCG1P45844 678 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 LEPRP48357 1165 aaKnown RBP15.58■□□□□ 0.08
CTSA-202ENST00000354880 CD151P48509 253 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 PTSQ03393 145 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 PEX6Q13608 980 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 C2orf27AQ580R0 203 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 IER5LQ5T953 404 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 PARS2Q7L3T8 475 aaKnown RBP15.58■□□□□ 0.08
CTSA-202ENST00000354880 SDCCAG8Q86SQ7 713 aaPredicted RBP15.58■□□□□ 0.08
CTSA-202ENST00000354880 DCLK2Q8N568 766 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 PBXIP1Q96AQ6 731 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 MSANTD3Q96H12 275 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 SSU72Q9NP77 194 aaKnown RBP15.58■□□□□ 0.08
CTSA-202ENST00000354880 SLC2A4RGQ9NR83 387 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 FBXO6Q9NRD1 293 aaPredicted RBP15.58■□□□□ 0.08
CTSA-202ENST00000354880 ADAM21Q9UKJ8 722 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 SCN8AQ9UQD0 1980 aa15.58■□□□□ 0.08
CTSA-202ENST00000354880 TMEM120BA0PK00 339 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 LOC730098B7Z3J9 87 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 C1QTNF3-AMACRE9PGA6 284 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 SPAG7O75391 227 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 HAUS5O94927 633 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 ALDOAP04075 364 aaKnown RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 PYGBP11216 843 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 ZNF30P17039 623 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 NTSR1P30989 418 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 VIPR1P32241 457 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 FOXN2P32314 431 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 METAP1P53582 386 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 XIAPP98170 497 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 PPARDQ03181 441 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 CAMK2GQ13555 558 aaPredicted RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 ARHGEF7Q14155 803 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 SH2D5Q6ZV89 423 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 LDB1Q86U70 411 aaPredicted RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 MMAAQ8IVH4 418 aaKnown RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 CBARPQ8N350 705 aaPredicted RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 GPR22Q99680 433 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 DYRK4Q9NR20 520 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 SMG5Q9UPR3 1016 aaKnown RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 MTO1Q9Y2Z2 717 aaKnown RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 PRPF4O43172 522 aaKnown RBP eCLIP15.57■□□□□ 0.082e-6■■■■□ 20.9
CTSA-202ENST00000354880 SYNCRIPO60506 623 aaKnown RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 S1PR4O95977 384 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 CHRM1P11229 460 aaPredicted RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 BPIP17213 487 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 SLC18A2Q05940 514 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 SEMA3AQ14563 771 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 TYSND1Q2T9J0 566 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 ZRANB3Q5FWF4 1079 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 ZNF789Q5FWF6 425 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 SDE2Q6IQ49 451 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 ERAP2Q6P179 960 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 PNPLA1Q8N8W4 532 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 SCG3Q8WXD2 468 aaKnown RBP15.57■□□□□ 0.08
CTSA-202ENST00000354880 ISL2Q96A47 359 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 ARRDC3Q96B67 414 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 ERLEC1Q96DZ1 483 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 APPL1Q9UKG1 709 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 SLC30A1Q9Y6M5 507 aa15.57■□□□□ 0.08
CTSA-202ENST00000354880 TPP1O14773 563 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 TYROBPO43914 113 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 PRSS56P0CW18 603 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 PMLP29590 882 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 TYK2P29597 1187 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 PSMD8P48556 350 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 STC1P52823 247 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 SLC44A4Q53GD3 710 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 FAM46CQ5VWP2 391 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 FBXL19Q6PCT2 694 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 CNSTQ6PJW8 725 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 DPPA4Q7L190 304 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 TRMT11Q7Z4G4 463 aaKnown RBP15.56■□□□□ 0.08
CTSA-202ENST00000354880 BANPQ8N9N5 519 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 IL17RCQ8NAC3 791 aa15.56■□□□□ 0.08
CTSA-202ENST00000354880 MDM1Q8TC05 714 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms