RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 DCDC5Q6ZRR9 648 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 CAMK1DQ8IU85 385 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 XXYLT1Q8NBI6 393 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SRFBP1Q8NEF9 429 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RNASE8Q8TDE3 154 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ST7LQ8TDW4 575 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 EXTL1Q92935 676 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FAM149B1Q96BN6 582 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ZC3HAV1LQ96H79 300 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 CEP295NLQ96MC4 621 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FCRL5Q96RD9 977 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 MXRA8Q9BRK3 442 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FUT8Q9BYC5 575 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 KCNN2Q9H2S1 579 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SFXN1Q9H9B4 322 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SEC61A2Q9H9S3 476 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PRMT7Q9NVM4 692 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SEMA5BQ9P283 1151 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TESQ9UGI8 421 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ADAM21Q9UKJ8 722 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 KAT6AQ92794 2004 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PREX2Q70Z35 1606 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 A0A1W2PPC1 479 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 NPEPPSL1A6NEC2 478 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FOXD2O60548 495 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RSL1D1O76021 490 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ONECUT2O95948 504 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 THEGLP0DJG4 465 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TNNT1P13805 278 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PDGFRAP16234 1089 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PTPN3P26045 913 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 NMBRP28336 390 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 MMP14P50281 582 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 EEFSECP57772 596 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PTENP60484 403 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF273Q14593 569 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 GPR162Q16538 588 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ANXA2RQ3ZCQ2 193 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 KRTCAP3Q53RY4 240 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RAPH1Q70E73 1250 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 AMIGO2Q86SJ2 522 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 DENND6AQ8IWF6 608 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 LGI4Q8N135 537 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF276Q8N554 614 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PARP16Q8N5Y8 322 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ZBTB2Q8N680 514 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 OR4N2Q8NGD1 307 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 OR8K5Q8NH50 307 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 EME1Q96AY2 570 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RRNAD1Q96FB5 475 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 BOD1Q96IK1 185 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 EGLN2Q96KS0 407 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RUNDC3BQ96NL0 473 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 MPHOSPH9Q99550 1183 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 THAP7Q9BT49 309 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TRIM7Q9C029 511 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 MTMR10Q9NXD2 777 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TAS2R14Q9NYV8 317 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 COPG2Q9UBF2 871 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ODF2LQ9ULJ1 636 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 DHDHQ9UQ10 334 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FAM96BQ9Y3D0 163 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 CEPT1Q9Y6K0 416 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 REREQ9P2R6 1566 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 OTOL1A6NHN0 477 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 GOLGA6L6A8MZA4 724 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 MSI1O43347 362 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 CREG1O75629 220 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ZFYP08048 801 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ADRB1P08588 477 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ATP5DP30049 168 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TUBB4BP68371 445 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TUBB2AQ13885 445 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 C5orf22Q49AR2 442 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ESCO2Q56NI9 601 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 PCID2Q5JVF3 399 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 IGFL4Q6B9Z1 124 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 WDR73Q6P4I2 378 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TMEM270Q6UE05 265 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 GLB1LQ6UWU2 654 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 GBP6Q6ZN66 633 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 BTN2A1Q7KYR7 527 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 IQCHQ86VS3 1027 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 RASAL3Q86YV0 1011 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 VRK3Q8IV63 474 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 LNX2Q8N448 690 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ZCCHC9Q8N567 271 aaKnown RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 DBF4BQ8NFT6 615 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SPATA18Q8TC71 538 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TAS1R2Q8TE23 839 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 WBP2Q969T9 261 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 H2AFJQ9BTM1 129 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ABHD6Q9BV23 337 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 TUBB2BQ9BVA1 445 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 IFT27Q9BW83 186 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 FSD1LQ9BXM9 530 aa1.67□□□□□ -2.14
BRCA1-202ENST00000354071 SEBOXQ9HB31 216 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-202ENST00000354071 ENTPD7Q9NQZ7 604 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms