RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 NUDT5Q9UKK9 219 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 TRPV2Q9Y5S1 764 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 TDRD15B5MCY1 1934 aaKnown RBP24.52■■□□□ 1.52
CPNE1-202ENST00000352393 J3KR12 359 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 PIP5K1BO14986 540 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 CDH15P55291 814 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 PRAMEP78395 509 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 TIAL1Q01085 375 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■■■ 29.1
CPNE1-202ENST00000352393 SIRPB2Q5JXA9 342 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 ZNF549Q6P9A3 640 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 MIER2Q8N344 545 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 CBR4Q8N4T8 237 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 OR52K2Q8NGK3 314 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 EXT2Q93063 718 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 TADA1Q96BN2 335 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 HMCESQ96FZ2 354 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 KLHL5Q96PQ7 755 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 TUBA8Q9NY65 449 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-202ENST00000352393 DOCK3Q8IZD9 2030 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 A0A0J9YVX5 310 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 MATN4O95460 622 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 MYF6P23409 242 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 NME5P56597 212 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 INPP5AQ14642 412 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 ZNF683Q8IZ20 524 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.51■■□□□ 1.512e-6■■■■■ 26.8
CPNE1-202ENST00000352393 SLC45A3Q96JT2 553 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 C1orf74Q96LT6 269 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 IL1RL2Q9HB29 575 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 CMTM6Q9NX76 183 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 GMEB1Q9Y692 573 aa24.51■■□□□ 1.51
CPNE1-202ENST00000352393 M0QZ92 97 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 M0QZQ0 153 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 PPP6CO00743 305 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 AZIN1O14977 448 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 LDB2O43679 373 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 B3GAT3O94766 335 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 ATXN1LP0C7T5 689 aaKnown RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 SUOXP51687 545 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 FOXA1P55317 472 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 ACVR1Q04771 509 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 ITKQ08881 620 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 GRB7Q14451 532 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 LPIN1Q14693 890 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 MAPRE1Q15691 268 aaKnown RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 VPS26BQ4G0F5 336 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 MARC1Q5VT66 337 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 CAMK1DQ8IU85 385 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 DIS3LQ8TF46 1054 aaKnown RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 FEM1CQ96JP0 617 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 SERPINB11Q96P15 392 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 MID1IP1Q9NPA3 183 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 PRDM5Q9NQX1 630 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 DSEQ9UL01 958 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 CRYL1Q9Y2S2 319 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 KCTD3Q9Y597 815 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 TRIM64A6NGJ6 449 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 ANGPT2O15123 496 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 SIX3O95343 332 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 HAPLN1P10915 354 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 PLOD1Q02809 727 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 MYBPC3Q14896 1274 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 DHRS4L2Q6PKH6 230 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 SPPL2CQ8IUH8 684 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 LZICQ8WZA0 190 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 LIN28AQ9H9Z2 209 aaKnown RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 SDR39U1Q9NRG7 319 aaPredicted RBP24.5■■□□□ 1.51
CPNE1-202ENST00000352393 ACTR3BQ9P1U1 418 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 AURKCQ9UQB9 309 aa24.5■■□□□ 1.51
CPNE1-202ENST00000352393 SLC4A1P02730 911 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 GNAO1P09471 354 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 SLC2A3P11169 496 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 MTHFD2P13995 350 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 UGT1A6P19224 532 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 SLC6A2P23975 617 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 PURAQ00577 322 aaKnown RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 TNK2Q07912 1038 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 OR4D1Q15615 310 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 COQ5Q5HYK3 327 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 OVOS1Q6IE37 1185 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 TFAP2DQ7Z6R9 452 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 MRPL10Q7Z7H8 261 aaKnown RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 ADGRG5Q8IZF4 528 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 TEX26Q8N6G2 289 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 TNIP2Q8NFZ5 429 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 CYP2S1Q96SQ9 504 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 PARK7Q99497 189 aaKnown RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 ADI1Q9BV57 179 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 TUBB1Q9H4B7 451 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 AGO3Q9H9G7 860 aaKnown RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 SLC52A3Q9NQ40 469 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 PTBP2Q9UKA9 531 aaKnown RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 PLXNA3P51805 1871 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 TTC3P53804 2025 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 CROCCQ5TZA2 2017 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 A0A1W2PQH9 124 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 LRRC14BA6NHZ5 514 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 RHOQP17081 205 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 PSMA4P25789 261 aaKnown RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 FOXM1Q08050 763 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms