RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 MPP3Q13368 585 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 ANKRD20A2Q5SQ80 823 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 ANKRD20A1Q5TYW2 823 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 ANKRD20A3Q5VUR7 823 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 ITPRIPL1Q6GPH6 555 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 SLC13A5Q86YT5 568 aaPredicted RBP22.06■■□□□ 1.12
SNX3-202ENST00000349379 PHACTR4Q8IZ21 702 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 NRSN1Q8IZ57 195 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 RBFAQ8N0V3 343 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 BTN2A2Q8WVV5 523 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 WDR92Q96MX6 357 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 SPATA13Q96N96 652 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 FERMT1Q9BQL6 677 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 TCEAL2Q9H3H9 227 aaPredicted RBP22.06■■□□□ 1.12
SNX3-202ENST00000349379 FTSJ1Q9UET6 329 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 RSPH14Q9UHP6 348 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 WASF3Q9UPY6 502 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 CSNK1G3Q9Y6M4 447 aa22.06■■□□□ 1.12
SNX3-202ENST00000349379 ARHGEF17Q96PE2 2063 aaPredicted RBP22.06■■□□□ 1.12
SNX3-202ENST00000349379 C1orf232A0A0U1RR37 186 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 CACNB4O00305 520 aaPredicted RBP22.05■■□□□ 1.12
SNX3-202ENST00000349379 TRIM38O00635 465 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 SCAMP1O15126 338 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 FTH1P19P0C7X4 201 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 ALG11Q2TAA5 492 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 NYAP1Q6ZVC0 841 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 KDELC2Q7Z4H8 507 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 REXO1L1PQ8IX06 675 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 KLHDC8BQ8IXV7 354 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 OR4C6Q8NH72 309 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 EID2BQ96D98 161 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 WDR24Q96S15 920 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 LGR4Q9BXB1 951 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 WDR26Q9H7D7 661 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 APOBEC3BQ9UH17 382 aaKnown RBP22.05■■□□□ 1.12
SNX3-202ENST00000349379 MYLKQ15746 1914 aa22.05■■□□□ 1.12
SNX3-202ENST00000349379 PLXNB3Q9ULL4 1909 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 RGSL1A5PLK6 1076 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 C5orf60A6NFR6 353 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 TMEM202A6NGA9 273 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 PTMAP06454 111 aaKnown RBP22.04■■□□□ 1.12
SNX3-202ENST00000349379 MYCLP1P12525 358 aaPredicted RBP22.04■■□□□ 1.12
SNX3-202ENST00000349379 SPINT3P49223 89 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 BLKP51451 505 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 HK3P52790 923 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 PPARDQ03181 441 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 PROX2Q3B8N5 592 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 KCTD16Q68DU8 428 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 ENPP7Q6UWV6 458 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 LYSMD3Q7Z3D4 306 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 SLCO6A1Q86UG4 719 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 ATL2Q8NHH9 583 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 CCDC110Q8TBZ0 833 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 ANP32BQ92688 251 aaKnown RBP22.04■■□□□ 1.12
SNX3-202ENST00000349379 SCAMP4Q969E2 229 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 AP2M1Q96CW1 435 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 CNDP2Q96KP4 475 aaKnown RBP22.04■■□□□ 1.12
SNX3-202ENST00000349379 LRRC61Q9BV99 259 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 FRMD8P1Q9BZ68 369 aaPredicted RBP22.04■■□□□ 1.12
SNX3-202ENST00000349379 NLGN3Q9NZ94 848 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 NFKBIL1Q9UBC1 381 aaPredicted RBP22.04■■□□□ 1.12
SNX3-202ENST00000349379 SPASTQ9UBP0 616 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 CD84Q9UIB8 345 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 DGKBQ9Y6T7 804 aa22.04■■□□□ 1.12
SNX3-202ENST00000349379 NEMP2A6NFY4 417 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 F5H423 210 aaPredicted RBP22.03■■□□□ 1.12
SNX3-202ENST00000349379 TNFRSF10CO14798 259 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 AQP9O43315 295 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 STK10O94804 968 aaKnown RBP22.03■■□□□ 1.12
SNX3-202ENST00000349379 LDOC1O95751 146 aaPredicted RBP22.03■■□□□ 1.12
SNX3-202ENST00000349379 KELP23276 732 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 CDK3Q00526 305 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 RAET1GQ6H3X3 334 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 ADAMTSL4Q6UY14 1074 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 TMC3Q7Z5M5 1100 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 HEATR4Q86WZ0 1026 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 OR56A4Q8NGH8 313 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 CCHCR1Q8TD31 782 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 TSACCQ96A04 125 aaPredicted RBP22.03■■□□□ 1.12
SNX3-202ENST00000349379 PDXPQ96GD0 296 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 SRPK1Q96SB4 655 aaKnown RBP22.03■■□□□ 1.12
SNX3-202ENST00000349379 ZFYVE1Q9HBF4 777 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 FGF22Q9HCT0 170 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 PHPT1Q9NRX4 125 aaPredicted RBP22.03■■□□□ 1.12
SNX3-202ENST00000349379 KLQ9UEF7 1012 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 ZNF711Q9Y462 761 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 SPO11Q9Y5K1 396 aa22.03■■□□□ 1.12
SNX3-202ENST00000349379 PDE2AO00408 941 aaPredicted RBP22.02■■□□□ 1.12
SNX3-202ENST00000349379 ENC1O14682 589 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 SIGLEC6O43699 453 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 GCATO75600 419 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 ANXA9O76027 345 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 RASGRP1O95267 797 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 PYGLP06737 847 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 PIRTP0C851 137 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 HLA-DPA1P20036 260 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 PSMB4P28070 264 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 CHRNA4P43681 627 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 GEMP55040 296 aa22.02■■□□□ 1.12
SNX3-202ENST00000349379 SRP54P61011 504 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms