RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 MAGEE1Q9HCI5 957 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 AMBNQ9NP70 447 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 IPO11Q9UI26 975 aaKnown RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 SLC30A1Q9Y6M5 507 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 TCRBV3S1A0A5B6 114 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 CD4P01730 458 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 LINC00032P0C843 101 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 TPSB2P20231 275 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 SIM2Q14190 667 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 E2F2Q14209 437 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 TARBP2Q15633 366 aaKnown RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 TPSAB1Q15661 275 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 WDR45BQ5MNZ6 344 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 TMEM176AQ96HP8 235 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 CSPG4P5Q96PW8 444 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 RHNO1Q9BSD3 238 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 SLC25A23Q9BV35 468 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 LRRC40Q9H9A6 602 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 IL37Q9NZH6 218 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 NUP214P35658 2090 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 TRPC5OSA6NMA1 111 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 PDZK1P1A8MUH7 402 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 GPD2P43304 727 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 PITX1P78337 314 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 DESI1Q6ICB0 168 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 CUZD1Q86UP6 607 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 CADM2Q8N3J6 435 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 REPS2Q8NFH8 660 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 TBCDQ9BTW9 1192 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 ENTPD7Q9NQZ7 604 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 ANKMY1Q9P2S6 941 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 CNOT11Q9UKZ1 510 aaKnown RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 SNX8Q9Y5X2 465 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 NCF1BA6NI72 391 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 NCF1CA8MVU1 366 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 SSX4O60224 188 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 NCF1P14598 390 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 INSCQ1MX18 579 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 STEAP4Q687X5 459 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 NAPEPLDQ6IQ20 393 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 KIAA0408Q6ZU52 694 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 IPMKQ8NFU5 416 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 OMA1Q96E52 524 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 C3orf30Q96M34 536 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 PDGFDQ9GZP0 370 aaPredicted RBP15.16■□□□□ 0.02
PTBP1-201ENST00000349038 RASSF1Q9NS23 344 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 C14orf119Q9NWQ9 140 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 IFT52Q9Y366 437 aa15.16■□□□□ 0.02
PTBP1-201ENST00000349038 ALDH1A2O94788 518 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 DNTTP04053 509 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 BMPR1AP36894 532 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 ACAP2Q15057 778 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 PCSK7Q16549 785 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 TMTC4Q5T4D3 741 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 EEF1DP3Q658K8 133 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 ZNF773Q6PK81 442 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 ZYG11AQ6WRX3 759 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 ARMC8Q8IUR7 673 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 KCTD15Q96SI1 283 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-201ENST00000349038 MRPL40Q9NQ50 206 aaKnown RBP15.15■□□□□ 0.02
PTBP1-201ENST00000349038 TRMT13Q9NUP7 481 aaKnown RBP15.15■□□□□ 0.02
PTBP1-201ENST00000349038 IGKV6D-21A0A0A0MT36 114 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 SIX3O95343 332 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-201ENST00000349038 FTH1P02794 183 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 BMP2P12643 396 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 TCF3P15923 654 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 STMN1P16949 149 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 CHRNA5P30532 468 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 IFNA8P32881 189 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 HLCSP50747 726 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 NRG1Q02297 640 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-201ENST00000349038 GALNT2Q10471 571 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 MAPRE2Q15555 327 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 ANKRD13AQ8IZ07 590 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 C8orf59Q8N0T1 100 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-201ENST00000349038 SPARTQ8N0X7 666 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 ANKFN1Q8N957 763 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 MTMR14Q8NCE2 650 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 HEXDCQ8WVB3 486 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 TNKS2Q9H2K2 1166 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 CDHR5Q9HBB8 845 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 CCM2LQ9NUG4 571 aaPredicted RBP15.15■□□□□ 0.02
PTBP1-201ENST00000349038 ANAPC2Q9UJX6 822 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 NDUFAF1Q9Y375 327 aa15.15■□□□□ 0.02
PTBP1-201ENST00000349038 FER1L6Q2WGJ9 1857 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 A0A087WZ62 844 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 B4GALT4O60513 344 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 CLASP2O75122 1294 aaKnown RBP15.14■□□□□ 0.01
PTBP1-201ENST00000349038 TSC22D2O75157 780 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 GCATO75600 419 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 AHSGP02765 367 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 CAPN1P07384 714 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 ZNF37AP17032 561 aaPredicted RBP15.14■□□□□ 0.01
PTBP1-201ENST00000349038 GGT5P36269 586 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 EFNA5P52803 228 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 CEP78Q5JTW2 689 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 ERO1BQ86YB8 467 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 SLC38A6Q8IZM9 456 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 SPATA22Q8NHS9 363 aa15.14■□□□□ 0.01
PTBP1-201ENST00000349038 MCFD2Q8NI22 146 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms