RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ITM2CQ9NQX7 267 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 C20orf96Q9NUD7 363 aaPredicted RBP27.03■■□□□ 1.92
SSBP4-202ENST00000348495 EBF1Q9UH73 591 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 ZNF106Q9H2Y7 1883 aaKnown RBP27.03■■□□□ 1.92
SSBP4-202ENST00000348495 MAP2K7O14733 419 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 PLRG1O43660 514 aaKnown RBP27.02■■□□□ 1.92
SSBP4-202ENST00000348495 ELFN1P0C7U0 828 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 ACADMP11310 421 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 BPIP17213 487 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 GM2AP17900 193 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 SPINT3P49223 89 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 TPMTP51580 245 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 MGAT5Q09328 741 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 KBTBD12Q3ZCT8 623 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 MICALCLQ6ZW33 695 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 KCNMB4Q86W47 210 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 RAVER1Q8IY67 606 aaKnown RBP27.02■■□□□ 1.92
SSBP4-202ENST00000348495 OR2W6PQ8NHA6 318 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 HHIPQ96QV1 700 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 CYTH2Q99418 400 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 WRAP53Q9BUR4 548 aaKnown RBP27.02■■□□□ 1.92
SSBP4-202ENST00000348495 VIPAS39Q9H9C1 493 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 USP36Q9P275 1121 aaKnown RBP27.02■■□□□ 1.92
SSBP4-202ENST00000348495 FKBPLQ9UIM3 349 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 CCDC162PA2VCL2 907 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 TSPAN6O43657 245 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 PI15O43692 258 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 IGLV3-19P01714 112 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 XIAPP98170 497 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 CREB5Q02930 508 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 STAT4Q14765 748 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 EFTUD2Q15029 972 aaKnown RBP eCLIP27.02■■□□□ 1.926e-7■■■■■ 42
SSBP4-202ENST00000348495 ANO7Q6IWH7 933 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 RFLNAQ6ZTI6 216 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 RASSF3Q86WH2 238 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 GANCQ8TET4 914 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 SGSM3Q96HU1 749 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 ZIM3Q96PE6 472 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 CD93Q9NPY3 652 aa27.02■■□□□ 1.92
SSBP4-202ENST00000348495 CXorf49A8MYA2 514 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-202ENST00000348495 NEMP1O14524 444 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 GAPDHSO14556 408 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-202ENST00000348495 PIAS1O75925 651 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 SASH3O75995 380 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 PTPN5P54829 565 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 ADPRHP54922 357 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 PRAMEP78395 509 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 PEX6Q13608 980 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 HSP90AA5PQ58FG0 334 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 ALS2CLQ60I27 953 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 TECPR1Q7Z6L1 1165 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 GPR26Q8NDV2 337 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 COQ10AQ96MF6 247 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 IL26Q9NPH9 171 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 NCKAP1Q9Y2A7 1128 aa27.01■■□□□ 1.91
SSBP4-202ENST00000348495 RGSL1A5PLK6 1076 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 GOLGA8KD6RF30 607 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 GOLGA8TH3BQL2 631 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 AOC1P19801 751 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 SMAD1Q15797 465 aaKnown RBP27■■□□□ 1.91
SSBP4-202ENST00000348495 CNTN4Q8IWV2 1026 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 PPANQ9NQ55 473 aaKnown RBP27■■□□□ 1.91
SSBP4-202ENST00000348495 PKD2L2Q9NZM6 624 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 VPS18Q9P253 973 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 BCCIPQ9P287 314 aaKnown RBP eCLIP27■■□□□ 1.91
SSBP4-202ENST00000348495 NFKBIL1Q9UBC1 381 aaPredicted RBP27■■□□□ 1.91
SSBP4-202ENST00000348495 FETUBQ9UGM5 382 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 LRRK1Q38SD2 2015 aa27■■□□□ 1.91
SSBP4-202ENST00000348495 OR51F1A6NGY5 319 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 MMP20O60882 483 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 TCEA3O75764 348 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 GOT2P00505 430 aaKnown RBP26.99■■□□□ 1.91
SSBP4-202ENST00000348495 C6P13671 934 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 KLHL38Q2WGJ6 581 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 TEDDM1Q5T9Z0 273 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 ZDHHC20Q5W0Z9 365 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 NEPROQ6NW34 567 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 AFTPHQ6ULP2 937 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 LRIG3Q6UXM1 1119 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 Q6ZVL8 140 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 OR6P1Q8NGX9 317 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 OR14C36Q8NHC7 312 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 PLEKHG4BQ96PX9 1271 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 TMEM221A6NGB7 291 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 M0R296 226 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 APBB3O95704 486 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 SPAM1P38567 509 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 ETV3P41162 512 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 EIF3BP55884 814 aaKnown RBP26.99■■□□□ 1.91
SSBP4-202ENST00000348495 DCDC1P59894 354 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 CYP2U1Q7Z449 544 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 PGBD3Q8N328 593 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 CAMKK1Q8N5S9 505 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 OR4L1Q8NH43 312 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 CXorf40AQ8TE69 158 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 TMEM109Q9BVC6 243 aa26.99■■□□□ 1.91
SSBP4-202ENST00000348495 BPTFQ12830 3046 aa26.98■■□□□ 1.91
SSBP4-202ENST00000348495 EXOC1LA0A1B0GW35 172 aa26.98■■□□□ 1.91
SSBP4-202ENST00000348495 GCAP28676 217 aa26.98■■□□□ 1.91
SSBP4-202ENST00000348495 MC4RP32245 332 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms