RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CDKN2AIPNLQ96HQ2 116 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 TTC25Q96NG3 672 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 LRFN3Q9BTN0 628 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 SLC17A6Q9P2U8 582 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 ZFR2Q9UPR6 939 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 TCRBV9S1A1TA0A576 114 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 GAPDHSO14556 408 aaPredicted RBP18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 RPP40O75818 363 aaKnown RBP18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 ALDH1A2O94788 518 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 SHBGP04278 402 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 F7P08709 466 aaPredicted RBP18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 PRSS56P0CW18 603 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 ERVK-10P10266 1014 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 TSHRP16473 764 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 ACSL1P33121 698 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 CA5AP35218 305 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 SPINT3P49223 89 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 CLCN5P51795 746 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 DMWDQ09019 674 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 EFTUD2Q15029 972 aaKnown RBP eCLIP18.97■□□□□ 0.633e-6■■■■□ 20.3
CHMP4A-201ENST00000347519 ARMC3Q5W041 872 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 SEL1L3Q68CR1 1132 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 KIAA0930Q6ICG6 404 aaPredicted RBP18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 Q6ZVL8 140 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 TECPR1Q7Z6L1 1165 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 GPR26Q8NDV2 337 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 FBF1Q8TES7 1133 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 COQ10AQ96MF6 247 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 ARFGAP3Q9NP61 516 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 ARGLU1Q9NWB6 273 aaPredicted RBP18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 MOCS1Q9NZB8 636 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 CD84Q9UIB8 345 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 RABGEF1Q9UJ41 708 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 FZD4Q9ULV1 537 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 CYP8B1Q9UNU6 501 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 NCKAP1Q9Y2A7 1128 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 FNDC3AQ9Y2H6 1198 aaKnown RBP18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 TRPM6Q9BX84 2022 aa18.97■□□□□ 0.63
CHMP4A-201ENST00000347519 PRR23AA6NEV1 266 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 CXorf49A8MYA2 514 aaPredicted RBP18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 NEMP1O14524 444 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 SLC7A4O43246 635 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 PCDH8O95206 1070 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 VAPBO95292 243 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 IGLV3-19P01714 112 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 ELFN1P0C7U0 828 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 C6P13671 934 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 ZNF30P17039 623 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 NFKBIAP25963 317 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 ETV3P41162 512 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 MAGEA9P43362 315 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 XIAPP98170 497 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 PEX6Q13608 980 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 LAMB3Q13751 1172 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 SKIDA1Q1XH10 827 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 TSSK4Q6SA08 328 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 KBTBD6Q86V97 674 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 RLN3Q8WXF3 142 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 ZBTB9Q96C00 473 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 IER2Q9BTL4 223 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 FUT8Q9BYC5 575 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 SPATA6Q9NWH7 488 aaPredicted RBP18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 BPTFQ12830 3046 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 PLXNB3Q9ULL4 1909 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 CACNA1IQ9P0X4 2223 aa18.96■□□□□ 0.63
CHMP4A-201ENST00000347519 IGLON5A6NGN9 336 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 H0Y858 1186 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 GPR39O43194 453 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 TSPAN6O43657 245 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 GOT2P00505 430 aaKnown RBP18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 ABHD2P08910 425 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 GSTA2P09210 222 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 CCR3P51677 355 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 PPP2CBP62714 309 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 PPP2CAP67775 309 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 PDE1BQ01064 536 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 FGL2Q14314 439 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 ACOX1Q15067 660 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 LONRF1Q17RB8 773 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 ALS2CLQ60I27 953 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 MAMSTRQ6ZN01 415 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 FAM160A2Q8N612 972 aaPredicted RBP18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 OR2W6PQ8NHA6 318 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 CXorf40AQ8TE69 158 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 KLK6Q92876 244 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 PEX13Q92968 403 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 CERS2Q96G23 380 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 FAM96AQ9H5X1 160 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 IL26Q9NPH9 171 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 C20orf96Q9NUD7 363 aaPredicted RBP18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 MARCH4Q9P2E8 410 aaPredicted RBP18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 PKP3Q9Y446 797 aa18.95■□□□□ 0.62
CHMP4A-201ENST00000347519 FAM47DPA6NHR8 397 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A9O60656 530 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 RNGTTO60942 597 aaKnown RBP18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 CDKN1CP49918 316 aaPredicted RBP18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 CCDC15Q0P6D6 951 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 FRG1Q14331 258 aaKnown RBP18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 SEMA3AQ14563 771 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 HSP90AA5PQ58FG0 334 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms