RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 GLUD1P00367 558 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 MPOP05164 745 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CR2P20023 1033 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ALDH3A1P30838 453 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CSKP41240 450 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ZNF460Q14592 562 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 USP10Q14694 798 aaKnown RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ZNF789Q5FWF6 425 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 WLSQ5T9L3 541 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 FYB2Q5VWT5 728 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CLEC14AQ86T13 490 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 BBS7Q8IWZ6 715 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 MRPL43Q8N983 215 aaKnown RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 SPPL3Q8TCT6 385 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 TCEAL4Q96EI5 215 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 C17orf80Q9BSJ5 609 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 FEM1AQ9BSK4 669 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 EMILIN2Q9BXX0 1053 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 SLC46A2Q9BY10 475 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 FBXO6Q9NRD1 293 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 PLK2Q9NYY3 685 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CLEC4EQ9ULY5 219 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ARL5AQ9Y689 179 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CEP290O15078 2479 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 TMCC1O94876 653 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 FGF1P05230 155 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 FGF3P11487 239 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 MYOGP15173 224 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 HLA-DPA1P20036 260 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 GRIA4P48058 902 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CSRP3P50461 194 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 SLC7A9P82251 487 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ACTN3Q08043 901 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 RFTN1Q14699 578 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 PCLAFQ15004 111 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 INSCQ1MX18 579 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 MBLAC2Q68D91 279 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 PSRC1Q6PGN9 363 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CNSTQ6PJW8 725 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 RAPH1Q70E73 1250 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 PTAR1Q7Z6K3 402 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 LDB1Q86U70 411 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 C10orf107Q8IVU9 208 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CEP97Q8IW35 865 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 FAM217AQ8IXS0 508 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ELMOD1Q8N336 334 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 OR6P1Q8NGX9 317 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 HERVK_113Q902F9 699 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 HDAC10Q969S8 669 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 PMEPA1Q969W9 287 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 KCNK13Q9HB14 408 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ASAH2Q9NR71 780 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 VPS28Q9UK41 221 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 FBXO5Q9UKT4 447 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 CCL26Q9Y258 94 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 OR51B4Q9Y5P0 310 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 USH1CQ9Y6N9 552 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 TRAV19A0A0A6YYK7 116 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 A0A0G2JND7 137 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 FAM95CA0A1B0GW59 222 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 LEFTY2O00292 366 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 DNAJC6O75061 913 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 SNNO75324 88 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 PAPSS2O95340 614 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 NDST3O95803 873 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 MT-CO1P00395 513 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 PRLP01236 227 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 EPOP01588 193 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 PDHA1P08559 390 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TROVE2P10155 538 aaKnown RBP eCLIP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 CDC25CP30307 473 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 CLCN4P51793 760 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 OCRLQ01968 901 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 CDH18Q13634 790 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 UGP2Q16851 508 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TBC1D25Q3MII6 688 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 GALNTL6Q49A17 601 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 PPM1LQ5SGD2 360 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 RBM20Q5T481 1227 aaKnown RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ATG16L1Q676U5 607 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TPGS1Q6ZTW0 290 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 HTR3DQ70Z44 454 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ERMP1Q7Z2K6 904 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TRIM42Q8IWZ5 723 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 APCDD1Q8J025 514 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TDRD5Q8NAT2 981 aaKnown RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 OR13C4Q8NGS5 318 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 SHKBP1Q8TBC3 707 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 MICAL1Q8TDZ2 1067 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 DDI1Q8WTU0 396 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ALG14Q96F25 216 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 DNAJC1Q96KC8 554 aaKnown RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TBATAQ96M53 351 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TCF12Q99081 682 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 NDNQ99608 321 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 FAM167BQ9BTA0 163 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 C1QTNF1Q9BXJ1 281 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TRIM55Q9BYV6 548 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 MYLK2Q9H1R3 596 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms