RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CNTN1Q12860 1018 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 FRMD7Q6ZUT3 714 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 GPR180Q86V85 440 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ZC3HC1Q86WB0 502 aaKnown RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 YAF2Q8IY57 180 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 STX19Q8N4C7 294 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 CBR4Q8N4T8 237 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 MIEF1Q9NQG6 463 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 DNAJB4Q9UDY4 337 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 PRKAG3Q9UGI9 489 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 LRRC42Q9Y546 428 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 C5P01031 1676 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 IGKV6-21A0A0C4DH24 114 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 KPNA3O00505 521 aaPredicted RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 AHSGP02765 367 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 MT-ND1P03886 318 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 AOC1P19801 751 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 TACR2P21452 398 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 EDNRBP24530 442 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 ITGA7Q13683 1181 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 AP5B1Q2VPB7 878 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 C6orf52Q5T4I8 152 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 DEPDC1Q5TB30 811 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 RGMBQ6NW40 437 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 PAOXQ6QHF9 649 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 TIFABQ6ZNK6 161 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 TRMT11Q7Z4G4 463 aaKnown RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 BPIFB6Q8NFQ5 453 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 OR2T12Q8NG77 320 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 OR2T34Q8NGX1 318 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 OR2T3Q8NH03 318 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 KCTD13Q8WZ19 329 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 APOL4Q9BPW4 351 aa7.19□□□□□ -1.26
VCAN-202ENST00000342785 MRPS26Q9BYN8 205 aaKnown RBP7.19□□□□□ -1.26
VCAN-202ENST00000342785 NPHS1O60500 1241 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 KCNE1P15382 129 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 GNA12Q03113 381 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 CLCQ05315 142 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 PITRM1Q5JRX3 1037 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 ACBD5Q5T8D3 534 aaPredicted RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 TBC1D21Q8IYX1 336 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 HMCESQ96FZ2 354 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 TBL1XO60907 577 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 COX7A2P14406 83 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 CES1P23141 567 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 RRM2P31350 389 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 MLLT6P55198 1093 aaPredicted RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 NRG1Q02297 640 aaPredicted RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 FAM151BQ6UXP7 276 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 SMOQ99835 787 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 RERGLQ9H628 205 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 PLK2Q9NYY3 685 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 RSL24D1Q9UHA3 163 aaKnown RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 NUP188Q5SRE5 1749 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 IGKV6D-21A0A0A0MT36 114 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 PRR23AA6NEV1 266 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 UBXN8O00124 270 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 FAM20BO75063 409 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 POLR2LP62875 67 aaKnown RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 UBE3AQ05086 875 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 PAFAH1B3Q15102 231 aaKnown RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 TSNQ15631 228 aaKnown RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 C11orf74Q86VG3 221 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 TPD52L3Q96J77 140 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 TSSK3Q96PN8 268 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 TTPALQ9BTX7 342 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 CNTN3Q9P232 1028 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 ADCY6O43306 1168 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 IDH2P48735 452 aaKnown RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 GPR15P49685 360 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 SLC10A7Q0GE19 358 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 PLCL1Q15111 1095 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 TJAP1Q5JTD0 557 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 MBLAC2Q68D91 279 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 BNIPLQ7Z465 357 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 RBFAQ8N0V3 343 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 AADATQ8N5Z0 425 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 STYXQ8WUJ0 223 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 RSPH1Q8WYR4 309 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 SKA1Q96BD8 255 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 PCDHAC1Q9H158 963 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 MTIF3Q9H2K0 278 aaKnown RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 REEP1Q9H902 201 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 ADPRHL2Q9NX46 363 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 GNPTGQ9UJJ9 305 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 TBC1D30Q9Y2I9 924 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 RAI2Q9Y5P3 530 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 LINC00854A0A1B0GVQ3 168 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 STX16-NPEPL1H3BU86 382 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 TBX18O95935 607 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 ALDOAP04075 364 aaKnown RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 CKMT2P17540 419 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 ITGAXP20702 1163 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 ST13P50502 369 aaKnown RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 CCL23P55773 120 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 USP41Q3LFD5 358 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 PPM1LQ5SGD2 360 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 BROXQ5VW32 411 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 GPR107Q5VW38 600 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 GLYATQ6IB77 296 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms