RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 LGR4Q9BXB1 951 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 SMG9Q9H0W8 520 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 PDCL3Q9H2J4 239 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 PABPC3Q9H361 631 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 USP29Q9HBJ7 922 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 PREBQ9HCU5 417 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TRPC7Q9HCX4 862 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ITM2CQ9NQX7 267 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 HAUS2Q9NVX0 235 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DEC1Q9P2X7 70 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 VPS51Q9UID3 782 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 AMFRQ9UKV5 643 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 CLEC4EQ9ULY5 219 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 FAM170BA6NMN3 283 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 GOLGA8SH3BPF8 625 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 APOL1O14791 398 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 MCF2LO15068 1137 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 PSMD3O43242 534 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 LIASO43766 372 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 CNTN5O94779 1100 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 MAP3K6O95382 1288 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 MOCS3O95396 460 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 FAM157BP0CG42 384 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 GOT1P17174 413 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 C5AR1P21730 350 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 MSX1P28360 303 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 TNFRSF8P28908 595 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 CSKP41240 450 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 RECQLP46063 649 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 TERF1P54274 439 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 TPI1P60174 286 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ECT2LQ008S8 904 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 SPEM2Q0P670 501 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 SLC10A2Q12908 348 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ZNF177Q13360 481 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ELAVL3Q14576 367 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ODF1Q14990 250 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 PDK1Q15118 436 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 PCBP2Q15366 365 aaKnown RBP eCLIP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ELF2Q15723 593 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 SMAD1Q15797 465 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 GEN1Q17RS7 908 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ANO4Q32M45 955 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 FSCBQ5H9T9 825 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 MBLAC2Q68D91 279 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 HEATR6Q6AI08 1181 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 C22orf39Q6P5X5 142 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 KDELC1Q6UW63 502 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 NLRC3Q7RTR2 1065 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 FAM131BQ86XD5 332 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ZNF513Q8N8E2 541 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ARRDC2Q8TBH0 407 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 UCMAQ8WVF2 138 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 DNASE2BQ8WZ79 361 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 PTPRN2Q92932 1015 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 FAM149B1Q96BN6 582 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 IMP4Q96G21 291 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ZNF419Q96HQ0 510 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 FCRL5Q96RD9 977 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 NAP1L3Q99457 506 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 BBS2Q9BXC9 721 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 DPH1Q9BZG8 443 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ZCCHC2Q9C0B9 1178 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 CCDC86Q9H6F5 360 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 L2HGDHQ9H9P8 463 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 SGK2Q9HBY8 427 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 CORINQ9Y5Q5 1042 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 AGAP14A8MT82 685 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 AP3B1O00203 1094 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 PRODHO43272 600 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 MFSD11O43934 449 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 RAMP2O60895 175 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ZNF217O75362 1048 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 TJP3O95049 919 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 APBB3O95704 486 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ATP5BP06576 529 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 RHOCP08134 193 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 TPSB2P20231 275 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ALAS2P22557 587 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 IGFALSP35858 605 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ARL4AP40617 200 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 P2RY2P41231 377 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 IL12RB1P42701 662 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 SLC6A11P48066 632 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 DRG2P55039 364 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 RPS14P62263 151 aaKnown RBP3.52□□□□□ -1.85
CCDC66-202ENST00000341455 TUBB4BP68371 445 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 CDK16Q00536 496 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 WASHC5Q12768 1159 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 SEMA5AQ13591 1074 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 ZNF234Q14588 700 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 TPSAB1Q15661 275 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 RETSATQ6NUM9 610 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 PCSK4Q6UW60 755 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 IL27RAQ6UWB1 636 aa3.52□□□□□ -1.85
CCDC66-202ENST00000341455 TMCO3Q6UWJ1 677 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms