RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 CYP4V2Q6ZWL3 525 aaPredicted RBP13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 CCDC112Q8NEF3 446 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 CCL4L1Q8NHW4 92 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 USP7Q93009 1102 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 DTD2Q96FN9 168 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 DPYSL5Q9BPU6 564 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 BPIFA3Q9BQP9 254 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 TRIM7Q9C029 511 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 SEMA4CQ9C0C4 833 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 ISCUQ9H1K1 167 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 SUDS3Q9H7L9 328 aaPredicted RBP13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 NOD2Q9HC29 1040 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 SPATS2LQ9NUQ6 558 aaKnown RBP13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 TAAR2Q9P1P5 351 aa13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 BZW2Q9Y6E2 419 aaKnown RBP13.05□□□□□ -0.32
NECTIN1-203ENST00000341398 ZFC3H1O60293 1989 aaKnown RBP13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 PRAMEF33A0A0G2JMD5 474 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 TTC24A2A3L6 582 aaPredicted RBP13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 DDX3XO00571 662 aaKnown RBP eCLIP13.04□□□□□ -0.321e-8■■■■■ 33.2
NECTIN1-203ENST00000341398 HGSO14964 777 aaPredicted RBP13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 EFSO43281 561 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 B4GAT1O43505 415 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 MAFKO60675 156 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 PRAMEF10O60809 474 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 FGF1P05230 155 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 GM2AP17900 193 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 ITIH1P19827 911 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 CR2P20023 1033 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 CES1P23141 567 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 ETV3P41162 512 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 GPR1P46091 355 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 OR1D5P58170 312 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 CDK3Q00526 305 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 DPTQ07507 201 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 ITKQ08881 620 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 TRA2AQ13595 282 aaKnown RBP eCLIP13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 TGIF1Q15583 401 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 SMTNL2Q2TAL5 461 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 ANO6Q4KMQ2 910 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 CCDC122Q5T0U0 273 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 Q6ZVL8 140 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 SLITRK4Q8IW52 837 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 CBARPQ8N350 705 aaPredicted RBP13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 TEKT4Q8WW24 435 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 CSPG4P5Q96PW8 444 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 FRMD8Q9BZ67 464 aaPredicted RBP13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 CDH19Q9H159 772 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 IP6K2Q9UHH9 426 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 DNPEPQ9ULA0 475 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 SUFUQ9UMX1 484 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 PIEZO2Q9H5I5 2752 aa13.04□□□□□ -0.32
NECTIN1-203ENST00000341398 AGRPO00253 132 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 SLC28A2O43868 658 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 PGLSO95336 258 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 ECEL1O95672 775 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 SERPINC1P01008 464 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 IVLP07476 585 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 RARAP10276 462 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 SKILP12757 684 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 PPM1FP49593 454 aaPredicted RBP13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 EPHB1P54762 984 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 MAZP56270 477 aaKnown RBP13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 KCNC4Q03721 635 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 KRT81Q14533 505 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 SLC30A9Q6PML9 568 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 ZNF438Q7Z4V0 828 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 HSD11B1LQ7Z5J1 315 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 NLRP8Q86W28 1048 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 C17orf82Q86X59 251 aaPredicted RBP13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 TP53INP2Q8IXH6 220 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 TAAR9Q96RI9 348 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 SEMA6CQ9H3T2 930 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 PPIL1Q9Y3C6 166 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 HECTD1Q9ULT8 2610 aa13.03□□□□□ -0.32
NECTIN1-203ENST00000341398 STMND1H3BQB6 276 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 PEX11BO96011 259 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 ZNF30P17039 623 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 CA4P22748 312 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 AK4P27144 223 aaPredicted RBP13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 IL1R2P27930 398 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 CSTF2P33240 577 aaKnown RBP eCLIP13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 ADCY8P40145 1251 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 ETV5P41161 510 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 SSR1P43307 286 aaKnown RBP13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 ATP1A2P50993 1020 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 MAXP61244 160 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 TPM4P67936 248 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 CTBSQ01459 385 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 TRAF2Q12933 501 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 NR1D2Q14995 579 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 TDRD12Q587J7 1177 aaKnown RBP13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 TIGD7Q6NT04 549 aaPredicted RBP13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 ZFAND4Q86XD8 727 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 SFTPA2Q8IWL1 248 aa13.02□□□□□ -0.33
NECTIN1-203ENST00000341398 PELI3Q8N2H9 469 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms