RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 IGHV4-34P06331 123 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 ESRRAP11474 423 aaPredicted RBP10.37□□□□□ -0.75
TPM3-207ENST00000341372 SSR1P43307 286 aaKnown RBP10.37□□□□□ -0.75
TPM3-207ENST00000341372 LIMK1P53667 647 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 SNRPD1P62314 119 aaKnown RBP10.37□□□□□ -0.75
TPM3-207ENST00000341372 ARHGAP8P85298 464 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 CNTN1Q12860 1018 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 MMRN1Q13201 1228 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 RFTN1Q14699 578 aaPredicted RBP10.37□□□□□ -0.75
TPM3-207ENST00000341372 PAFAH1B3Q15102 231 aaKnown RBP10.37□□□□□ -0.75
TPM3-207ENST00000341372 SF3A2Q15428 464 aaKnown RBP10.37□□□□□ -0.75
TPM3-207ENST00000341372 CYTH1Q15438 398 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 CCDC6Q16204 474 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 KIAA0895LQ68EN5 471 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 NCBP2-AS2Q69YL0 99 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 C1orf122Q6ZSJ8 110 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 TP53INP2Q8IXH6 220 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 DEFB119Q8N690 84 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 OR2T34Q8NGX1 318 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 PCDH19Q8TAB3 1148 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 CHTF18Q8WVB6 975 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 GDAP1L1Q96MZ0 367 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 ZNF599Q96NL3 588 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 HDAC8Q9BY41 377 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 TM6SF2Q9BZW4 377 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.37□□□□□ -0.75
TPM3-207ENST00000341372 PLXNA2O75051 1894 aa10.37□□□□□ -0.75
TPM3-207ENST00000341372 LRRC72A6NJI9 287 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 C3orf70A6NLC5 250 aaPredicted RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 TMEM110-MUSTN1A8MSY1 372 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 MEI4A8MW99 385 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 BNIP3LO60238 219 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 BUB1BO60566 1050 aaPredicted RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 H2AFYO75367 372 aaKnown RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 IPO7O95373 1038 aaKnown RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 PEX11BO96011 259 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 ITGB7P26010 798 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 GJC1P36383 396 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 LSSP48449 732 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 CCR5P51681 352 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 VAV2P52735 878 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 TAS2R38P59533 333 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 DUOXA1Q1HG43 343 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 ANKRD20A8PQ5CZ79 823 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 ARMC3Q5W041 872 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 TCEAL6Q6IPX3 200 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 LEKR1Q6ZMV7 388 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 ARHGAP36Q6ZRI8 547 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 LRRC49Q8IUZ0 686 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 MAP7D3Q8IWC1 876 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 RAPGEF5Q92565 580 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 TCEAL3Q969E4 200 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 BIRC7Q96CA5 298 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 PPP1R16AQ96I34 528 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 DHRS1Q96LJ7 313 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 TBATAQ96M53 351 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 OSBPL1AQ9BXW6 950 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 PREBQ9HCU5 417 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 IPO11Q9UI26 975 aaKnown RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 TFR2Q9UP52 801 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 SHROOM3Q8TF72 1996 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 ANKRD36A6QL64 1941 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 LNP1A1A4G5 178 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 PATE3B3GLJ2 98 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 DFFAO00273 331 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 KPNA3O00505 521 aaPredicted RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 LATO43561 262 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 PSTPIP1O43586 416 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 MFSD11O43934 449 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 MAFKO60675 156 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 POP4O95707 220 aaKnown RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 IGSF6O95976 241 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 SERPINF2P08697 491 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 COMTP21964 271 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 KDELR1P24390 212 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 RXRGP48443 463 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 CSNK1DP48730 415 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 RHOAP61586 193 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 GALNT2Q10471 571 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 NCEH1Q6PIU2 408 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 ERN2Q76MJ5 926 aaKnown RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 MAMDC2Q7Z304 686 aaPredicted RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 ADAT2Q7Z6V5 191 aaKnown RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 TRIM69Q86WT6 500 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 RHOT1Q8IXI2 618 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 PQLC3Q8N755 202 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 C12orf50Q8NA57 414 aaPredicted RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 KCTD6Q8NC69 237 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 NETO1Q8TDF5 533 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 GANCQ8TET4 914 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 DIO2Q92813 273 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 CALN1Q9BXU9 219 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 CPEB1Q9BZB8 566 aaKnown RBP10.36□□□□□ -0.75
TPM3-207ENST00000341372 SP110Q9HB58 689 aa10.36□□□□□ -0.75
TPM3-207ENST00000341372 TP53BP1Q12888 1972 aaPredicted RBP10.35□□□□□ -0.75
TPM3-207ENST00000341372 CACNA1AO00555 2505 aa10.35□□□□□ -0.75
TPM3-207ENST00000341372 A0A1B0GTW7 788 aa10.35□□□□□ -0.75
TPM3-207ENST00000341372 PLK4O00444 970 aa10.35□□□□□ -0.75
TPM3-207ENST00000341372 ECEL1O95672 775 aa10.35□□□□□ -0.75
TPM3-207ENST00000341372 CD27P26842 260 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms