RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ODF2LQ9ULJ1 636 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 ITM2BQ9Y287 266 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 MEGF11A6BM72 1044 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 TOR1BO14657 336 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 PCDH17O14917 1159 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 CLIC2O15247 247 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 NDUFA10O95299 355 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 TNFP01375 233 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 HOXC12P31275 282 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 KCNA1Q09470 495 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 EFHC1Q5JVL4 640 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 BHLHA9Q7RTU4 235 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 ZSCAN30Q86W11 494 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 WDR49Q8IV35 697 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 TP53I13Q8NBR0 393 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-201ENST00000340660 NOC3LQ8WTT2 800 aaKnown RBP11.16□□□□□ -0.62
ATXN3-201ENST00000340660 PATE1Q8WXA2 126 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 COX4I2Q96KJ9 171 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 NT5C1BQ96P26 610 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 GPR87Q9BY21 358 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 TMEM168Q9H0V1 697 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 XYLT2Q9H1B5 865 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 ZDHHC6Q9H6R6 413 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 PARVGQ9HBI0 331 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 LNPEPQ9UIQ6 1025 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 BTRCQ9Y297 605 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 DGKBQ9Y6T7 804 aa11.16□□□□□ -0.62
ATXN3-201ENST00000340660 HRNRQ86YZ3 2850 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-201ENST00000340660 TYW5A2RUC4 315 aaKnown RBP11.15□□□□□ -0.62
ATXN3-201ENST00000340660 GOLGA6L3A6NEY3 463 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 SART1O43290 800 aaKnown RBP11.15□□□□□ -0.62
ATXN3-201ENST00000340660 ECEL1O95672 775 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 IGLV3-27P01718 113 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 PRNPP04156 253 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 FGF1P05230 155 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 DNASE1P24855 282 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 SPAM1P38567 509 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 PEX5P50542 639 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 NFATC4Q14934 902 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 KYNUQ16719 465 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 MS4A13Q5J8X5 152 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 FAM199XQ6PEV8 388 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-201ENST00000340660 IRF2BP1Q8IU81 584 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 CRYBG2Q8N1P7 616 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 CIARTQ8N365 385 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-201ENST00000340660 ARHGAP18Q8N392 663 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 ZADH2Q8N4Q0 377 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 SH2D3CQ8N5H7 860 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 C4orf32Q8N8J7 132 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 KIAA1524Q8TCG1 905 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 OR1E3Q8WZA6 343 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 ELMO3Q96BJ8 720 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 BRMS1Q9HCU9 246 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 OLAHQ9NV23 265 aa11.15□□□□□ -0.62
ATXN3-201ENST00000340660 LEFTY1O75610 366 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 PLEKP08567 350 aaPredicted RBP11.14□□□□□ -0.63
ATXN3-201ENST00000340660 TSFMP43897 325 aaKnown RBP11.14□□□□□ -0.63
ATXN3-201ENST00000340660 SLC11A2P49281 568 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 SMSP52788 366 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 PLK1P53350 603 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 MYL6P60660 151 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 STK3Q13188 491 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 IRF4Q15306 451 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 KRT79Q5XKE5 535 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 ZNF324BQ6AW86 544 aaPredicted RBP11.14□□□□□ -0.63
ATXN3-201ENST00000340660 FAAH2Q6GMR7 532 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 FDX2Q6P4F2 183 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 SCARA5Q6ZMJ2 495 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 BEND4Q6ZU67 534 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 RNF34Q969K3 372 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 MBD6Q96DN6 1003 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 PPP1R16AQ96I34 528 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 JAKMIP1Q96N16 626 aaKnown RBP11.14□□□□□ -0.63
ATXN3-201ENST00000340660 PLIN2Q99541 437 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 ZNF559Q9BR84 538 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 CBWD1Q9BRT8 395 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 SOX17Q9H6I2 414 aaPredicted RBP11.14□□□□□ -0.63
ATXN3-201ENST00000340660 ZNF552Q9H707 407 aaPredicted RBP11.14□□□□□ -0.63
ATXN3-201ENST00000340660 ARHGEF38Q9NXL2 777 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 SLC25A13Q9UJS0 675 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 HIF3AQ9Y2N7 669 aa11.14□□□□□ -0.63
ATXN3-201ENST00000340660 MGAM2Q2M2H8 2515 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 TSPAN6O43657 245 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 LDHAP00338 332 aaKnown RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ESRRAP11474 423 aaPredicted RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 RPS6KB1P23443 525 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ABCD1P33897 745 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 DGKQP52824 942 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 TOB2Q14106 344 aaPredicted RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ZRSR1Q15695 479 aaKnown RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 PDLIM3Q53GG5 364 aaPredicted RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 FAM69BQ5VUD6 431 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 CPLX2Q6PUV4 134 aaKnown RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 C16orf47Q6ZP98 133 aaPredicted RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 MED25Q71SY5 747 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ZNF761Q86XN6 746 aaPredicted RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 DIS3L2Q8IYB7 885 aaKnown RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ARFGAP1Q8N6T3 406 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ATP11CQ8NB49 1132 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms