RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TRABD2BA6NFA1 517 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 SOWAHDA6NJG2 315 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 YY2O15391 372 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 OPA1O60313 960 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 PDHA1P08559 390 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 TNNT1P13805 278 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 CDC25BP30305 580 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 ETV3P41162 512 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 COPS2P61201 443 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 NIPAL4Q0D2K0 466 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 TARDBPQ13148 414 aaKnown RBP eCLIP13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 PEX6Q13608 980 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 PPP2R5EQ16537 467 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 LRRC66Q68CR7 880 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 SPOCD1Q6ZMY3 1216 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 HSD11B1LQ7Z5J1 315 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 TECPR1Q7Z6L1 1165 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 DAAM2Q86T65 1068 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 NT5DC3Q86UY8 548 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 EXD1Q8NHP7 514 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 MAPK15Q8TD08 544 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 TSACCQ96A04 125 aaPredicted RBP13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 PDXPQ96GD0 296 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 SRPK1Q96SB4 655 aaKnown RBP13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 CLPBQ9H078 707 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 CHKBQ9Y259 395 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 HYOU1Q9Y4L1 999 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 PCDHGA10Q9Y5H3 936 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 LRP4O75096 1905 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 ZFHX4Q86UP3 3567 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 TMEM202A6NGA9 273 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CST8O60676 142 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 TCEA3O75764 348 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 PRLP01236 227 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CTPS1P17812 591 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CD86P42081 329 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 STC1P52823 247 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 DYNLT1P63172 113 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 SKOR1P84550 965 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CDK3Q00526 305 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 PTSQ03393 145 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 ZBTB17Q13105 803 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 C1orf61Q13536 156 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 PRKD1Q15139 912 aaPredicted RBP13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CDKN3Q16667 212 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 TEX44Q53QW1 395 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CDCP2Q5VXM1 449 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 DENND2CQ68D51 928 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 RAET1GQ6H3X3 334 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CRTC1Q6UUV9 634 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 ADAMTSL4Q6UY14 1074 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 Q6ZVL8 140 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 RD3Q7Z3Z2 195 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 TSPAN33Q86UF1 283 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 HEATR4Q86WZ0 1026 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CNTD1Q8N815 330 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 ZNF454Q8N9F8 522 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 LPCAT1Q8NF37 534 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 CCHCR1Q8TD31 782 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 TFB1MQ8WVM0 346 aaKnown RBP13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 OR1E3Q8WZA6 343 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 P3H4Q92791 437 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 IMP4Q96G21 291 aaKnown RBP13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 DEPDC7Q96QD5 511 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 VAT1Q99536 393 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 BAG1Q99933 345 aaPredicted RBP13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 SLC25A51Q9H1U9 297 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 FGF22Q9HCT0 170 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 EFR3BQ9Y2G0 817 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 GOLGA4Q13439 2230 aaKnown RBP13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 LAMA5O15230 3695 aa13.31□□□□□ -0.28
SIRPB3P-201ENST00000340424 hCG_1818297A0A087WSY0 165 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 PRSS38A1L453 326 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 CCDC66A2RUB6 948 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 SRRM3A6NNA2 597 aaPredicted RBP13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 GOLGA6L6A8MZA4 724 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 HACD1B0YJ81 288 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 ANKRD66B4E2M5 251 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 ZNF500O60304 480 aaPredicted RBP13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 ZNF189O75820 626 aaPredicted RBP13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 MT-CO3P00414 261 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 MMP2P08253 660 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 CTNNA1P35221 906 aaKnown RBP13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 GPR1P46091 355 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 VAV2P52735 878 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 RTP5Q14D33 572 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 EFL1Q7Z2Z2 1120 aaKnown RBP13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 CCDC50Q8IVM0 306 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 SLC35F3Q8IY50 421 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 TADA1Q96BN2 335 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 AP2M1Q96CW1 435 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 FERMT1Q9BQL6 677 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 MLPHQ9BV36 600 aaPredicted RBP13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 LGR4Q9BXB1 951 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 FRMD8Q9BZ67 464 aaPredicted RBP13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 CDH19Q9H159 772 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 CAAP1Q9H8G2 361 aa13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 TRNAU1APQ9NX07 287 aaKnown RBP13.3□□□□□ -0.28
SIRPB3P-201ENST00000340424 SEPT10Q9P0V9 454 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms