RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 DGLUCYQ7Z3D6 616 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 PARGQ86W56 976 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 CCHCR1Q8TD31 782 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 SAP25Q8TEE9 199 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 SETD7Q8WTS6 366 aaKnown RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 MAIP1Q8WWC4 291 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 FUBP1Q96AE4 644 aaKnown RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 EID2BQ96D98 161 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 RTP4Q96DX8 246 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 MS4A14Q96JA4 679 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 PBKQ96KB5 322 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 ABCG8Q9H221 673 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 ZFYVE1Q9HBF4 777 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 GOLGA6AQ9NYA3 693 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 KLF15Q9UIH9 416 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 PNMA8BQ9ULN7 279 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 BTBD3Q9Y2F9 522 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 ZKSCAN5Q9Y2L8 839 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 AAR2Q9Y312 384 aaKnown RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 ZNF711Q9Y462 761 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 COL5A1P20908 1838 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 AURKAO14965 403 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 FLRT2O43155 660 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 METTL18O95568 372 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 SLC4A1P02730 911 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 ITGAVP06756 1048 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 TSHRP16473 764 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 HLA-DPA1P20036 260 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 CSRP1P21291 193 aaKnown RBP15.22■□□□□ 0.03
UBE3B-201ENST00000340074 KCNA4P22459 653 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 TRIM23P36406 574 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 SPINT3P49223 89 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 DPTQ07507 201 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 OLIG2Q13516 323 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 NFATC4Q14934 902 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 PARP6Q2NL67 630 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 PSAPL1Q6NUJ1 521 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 MACC1Q6ZN28 852 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 SCAMP4Q969E2 229 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 AP2M1Q96CW1 435 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 OSBPL9Q96SU4 736 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 FICDQ9BVA6 458 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 LGR4Q9BXB1 951 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 SLC32A1Q9H598 525 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 SPO11Q9Y5K1 396 aa15.22■□□□□ 0.03
UBE3B-201ENST00000340074 GIPC1O14908 333 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 KCNK5O95279 499 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 IFNB1P01574 187 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 CSF2P04141 144 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 ETS1P14921 441 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 NME1P15531 152 aaKnown RBP15.21■□□□□ 0.03
UBE3B-201ENST00000340074 HTR1BP28222 390 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 ADRA1AP35348 466 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 NOVA1P51513 510 aaKnown RBP15.21■□□□□ 0.03
UBE3B-201ENST00000340074 GNG11P61952 73 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 P3H1Q32P28 736 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 PPM1JQ5JR12 505 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 FAXCQ5TGI0 409 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 RAET1GQ6H3X3 334 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 DRICH1Q6PGQ1 229 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-201ENST00000340074 ENPP7Q6UWV6 458 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 RANBP10Q6VN20 620 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 NYAP1Q6ZVC0 841 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 KANSL1Q7Z3B3 1105 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 TMC3Q7Z5M5 1100 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 PRUNE1Q86TP1 453 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 RAVER1Q8IY67 606 aaKnown RBP15.21■□□□□ 0.03
UBE3B-201ENST00000340074 NRSN1Q8IZ57 195 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 TAB3Q8N5C8 712 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-201ENST00000340074 RHBDD1Q8TEB9 315 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 COG1Q8WTW3 980 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 PPP1R2P1Q96PQ5 205 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 SRPK1Q96SB4 655 aaKnown RBP15.21■□□□□ 0.03
UBE3B-201ENST00000340074 APOL2Q9BQE5 337 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 GPR63Q9BZJ6 419 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 WDR26Q9H7D7 661 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 UCKL1Q9NWZ5 548 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 PKD2L2Q9NZM6 624 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 PCOLCE2Q9UKZ9 415 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 SNX12Q9UMY4 172 aa15.21■□□□□ 0.03
UBE3B-201ENST00000340074 PLXNB3Q9ULL4 1909 aa15.21■□□□□ 0.02
UBE3B-201ENST00000340074 CACNB4O00305 520 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 CBFA2T3O75081 653 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 USP12O75317 370 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 PIAS2O75928 621 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 SOD1P00441 154 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 FGF1P05230 155 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 HOXC4P09017 264 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 CEACAM1P13688 526 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 JUNDP17535 347 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 GRK6P43250 576 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 GPR1P46091 355 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 HNRNPKP61978 463 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 SPARCL1Q14515 664 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 ZNF765Q7L2R6 523 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 HEATR4Q86WZ0 1026 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 KLHDC8BQ8IXV7 354 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 RBFAQ8N0V3 343 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 PRELID2Q8N945 189 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms