RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ANAPC2Q9UJX6 822 aa9.41□□□□□ -0.9
NECAP1-201ENST00000339754 TSPAN16Q9UKR8 245 aa9.41□□□□□ -0.9
NECAP1-201ENST00000339754 MAGED2Q9UNF1 606 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-201ENST00000339754 NDUFAF1Q9Y375 327 aa9.41□□□□□ -0.9
NECAP1-201ENST00000339754 PCDHGA8Q9Y5G5 932 aa9.41□□□□□ -0.9
NECAP1-201ENST00000339754 A0A0J9YYE9 177 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 FAM172BPA6NC97 362 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 AP2A1O95782 977 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 MT-CO1P00395 513 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 NR3C2P08235 984 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 CDH1P12830 882 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 TCF3P15923 654 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 SPNP16150 400 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 NCK1P16333 377 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 CHRM3P20309 590 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 ATP5F1P24539 256 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 ACVR2AP27037 513 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 ARSFP54793 590 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 COPZ1P61923 177 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 MEP1AQ16819 746 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 DGUOKQ16854 277 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 CTU2Q2VPK5 515 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 UBE2UQ5VVX9 321 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 TMEM236Q5W0B7 351 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 RFPL4BQ6ZWI9 263 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 PTRH1Q86Y79 214 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 LYSMD2Q8IV50 215 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 IQCF2Q8IXL9 164 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 LGI2Q8N0V4 545 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 C1orf127Q8N9H9 656 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 PHF10Q8WUB8 498 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 LRRC58Q96CX6 371 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 C3orf30Q96M34 536 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 B3GNT5Q9BYG0 378 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 MRM3Q9HC36 420 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 FAM49BQ9NUQ9 324 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 PDE10AQ9Y233 779 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 NAALAD2Q9Y3Q0 740 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 PCDHB3Q9Y5E6 796 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 MAGED1Q9Y5V3 778 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 M0R3G1 203 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 NR5A2O00482 541 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 ALPLP05186 524 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 UMPSP11172 480 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 ENDOUP21128 410 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 EIF2DP41214 584 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 GSK3BP49841 420 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 ALDH3A2P51648 485 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 GABARAPL2P60520 117 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 RAB10P61026 200 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 OSTNP61366 133 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 BST2Q10589 180 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 CCDC58Q4VC31 144 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 KCTD11Q693B1 232 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 SIGIRRQ6IA17 410 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 TAF2Q6P1X5 1199 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 SPNS2Q8IVW8 549 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 TP53INP2Q8IXH6 220 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 RIMKLAQ8IXN7 391 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 C12orf29Q8N999 325 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 DNAAF3Q8N9W5 541 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 OR13J1Q8NGT2 312 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 BPIFB1Q8TDL5 484 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 HEXDCQ8WVB3 486 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 TMEM125Q96AQ2 219 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 BIRC7Q96CA5 298 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 MRPL57Q9BQC6 102 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 BCL7BQ9BQE9 202 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 CHID1Q9BWS9 393 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 MRPL4Q9BYD3 311 aaKnown RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 TMEM39BQ9GZU3 492 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 PRDM12Q9H4Q4 367 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 SLC52A3Q9NQ40 469 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 NECTIN3Q9NQS3 549 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 PAK1IP1Q9NWT1 392 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-201ENST00000339754 PIM2Q9P1W9 311 aa9.4□□□□□ -0.9
NECAP1-201ENST00000339754 ANK1P16157 1881 aa9.4□□□□□ -0.91
NECAP1-201ENST00000339754 CNTNAP1P78357 1384 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 LOC105371267A0A1B0GV96 52 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 ISPDA4D126 451 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 ZNF99A8MXY4 864 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-201ENST00000339754 UBFD1O14562 309 aaKnown RBP9.39□□□□□ -0.91
NECAP1-201ENST00000339754 UPK1BO75841 260 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 PARNO95453 639 aaKnown RBP9.39□□□□□ -0.91
NECAP1-201ENST00000339754 GSNP06396 782 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 SUPT20HL2P0C7V6 817 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 THRBP10828 461 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 PRKCAP17252 672 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 TPH1P17752 444 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 AGXTP21549 392 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 BDNFP23560 247 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 CXCL9Q07325 125 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 DAG1Q14118 895 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 SUPT20HL1Q3ZLR7 823 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 SPATS1Q496A3 300 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 C8orf59Q8N0T1 100 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-201ENST00000339754 CCNYQ8ND76 341 aa9.39□□□□□ -0.91
NECAP1-201ENST00000339754 ANKK1Q8NFD2 765 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms