RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 CDKN2CP42773 168 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 NDST2P52849 883 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 TXNL4AP83876 142 aaKnown RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 ILF3Q12906 894 aaKnown RBP eCLIP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 POU6F1Q14863 301 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 SPATS1Q496A3 300 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 ERMP1Q7Z2K6 904 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 PID1Q7Z2X4 250 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 RELL1Q8IUW5 271 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 CYP4Z2PQ8N1L4 340 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 SCRN2Q96FV2 425 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 C12orf66Q96MD2 445 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 POP1Q99575 1024 aaKnown RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 C17orf75Q9HAS0 396 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 TREM1Q9NP99 234 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 RGS18Q9NS28 235 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 ADAM28Q9UKQ2 775 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 UGGT1Q9NYU2 1555 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 REM1O75628 298 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 ITGAVP06756 1048 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 SLC6A4P31645 630 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 BTDP43251 543 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 SLC26A2P50443 739 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 CDH4P55283 916 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 CDH18Q13634 790 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 PITRM1Q5JRX3 1037 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 EFHBQ8N7U6 833 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 ROPN1LQ96C74 230 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 DCPSQ96C86 337 aaKnown RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 CPXM1Q96SM3 734 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 LRRC40Q9H9A6 602 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 TM9SF3Q9HD45 589 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 TEX46H3BTG2 121 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 DCKP27707 260 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 DAG1Q14118 895 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 IL17REQ8NFR9 667 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 SLC44A1Q8WWI5 657 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 KCNN1Q92952 543 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 MECRQ9BV79 373 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 ZNF436Q9C0F3 470 aaPredicted RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 KCNN2Q9H2S1 579 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 TRAF6Q9Y4K3 522 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 IL18RAPO95256 599 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 CYP1A1P04798 512 aaPredicted RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 MSR1P21757 451 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 FAUP35544 74 aaKnown RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 RAB5CP51148 216 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 SNRPD2P62316 118 aaKnown RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 EIF5AP63241 154 aaKnown RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 RAPSNQ13702 412 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 CCNIQ14094 377 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 PAN3Q58A45 887 aaKnown RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 UNC5AQ6ZN44 842 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 SPATA6LQ8N4H0 392 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 Q8N9G6 341 aaPredicted RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 LRRC57Q8N9N7 239 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 HAVCR1Q96D42 359 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 ZNF578Q96N58 590 aaPredicted RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 GPN2Q9H9Y4 310 aaPredicted RBP12.63□□□□□ -0.39
BRPF3-201ENST00000339717 ABCB9Q9NP78 766 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 BARHL2Q9NY43 387 aa12.63□□□□□ -0.39
BRPF3-201ENST00000339717 A0A096LPK6 155 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 A0A0X1KG70 313 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 INMTO95050 263 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 CHRNA1P02708 482 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 RPS2P15880 293 aaKnown RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 RPS5P46782 204 aaKnown RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 IDH2P48735 452 aaKnown RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 PEX3P56589 373 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 PMS2P3Q13401 168 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 NPTX1Q15818 432 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 KCNA10Q16322 511 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 SPPL2CQ8IUH8 684 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 KATNAL2Q8IYT4 538 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 COQ8AQ8NI60 647 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 C9orf43Q8TAL5 461 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 HERVK_113Q902F9 699 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 C10orf90Q96M02 699 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 FSD1LQ9BXM9 530 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 ANKRD60Q9BZ19 345 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 KMT5AQ9NQR1 393 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 PAK1IP1Q9NWT1 392 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 KANTRA0A1W2PQU2 76 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 NUPL2O15504 423 aaKnown RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 ZNF254O75437 659 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 SPARCP09486 303 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 JUPP14923 745 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 SNAPC2Q13487 334 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 RHEBQ15382 184 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 GPAT3Q53EU6 434 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 ANKS1BQ7Z6G8 1248 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 MFSD2AQ8NA29 543 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 C3orf49Q96BT1 292 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 ERVK-5Q9HDB9 667 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 TBC1D30Q9Y2I9 924 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 TLL2Q9Y6L7 1015 aa12.62□□□□□ -0.39
BRPF3-201ENST00000339717 GATCO43716 136 aaKnown RBP12.62□□□□□ -0.39
BRPF3-201ENST00000339717 LYPLA1O75608 230 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms