RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 PREX2Q70Z35 1606 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 AP2A2O94973 939 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 TRUB2O95900 331 aaKnown RBP11.77□□□□□ -0.52
SHANK2-201ENST00000338508 CXCR3P49682 368 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 GMFBP60983 142 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 TLR1Q15399 786 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 LSM12Q3MHD2 195 aaKnown RBP11.77□□□□□ -0.52
SHANK2-201ENST00000338508 ZMIZ2Q8NF64 920 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 OR52J3Q8NH60 311 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 ARMC5Q96C12 935 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 MBOAT7Q96N66 472 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 CDH7Q9ULB5 785 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 SPEF1Q9Y4P9 236 aa11.77□□□□□ -0.52
SHANK2-201ENST00000338508 LGALS2P05162 132 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 GOT1P17174 413 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 KDELR1P24390 212 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 PTENP60484 403 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 CDK16Q00536 496 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 ADAMTS15Q8TE58 950 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 HIST1H2AAQ96QV6 131 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 PARPBPQ9NWS1 579 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 ANKRD63C9JTQ0 380 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 LOC110117498-PIK3R3F6TDL0 507 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 ENPP3O14638 875 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 APODP05090 189 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 SMIM10L2AP0DMW4 78 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 SMIM10L2BP0DMW5 78 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 CDH3P22223 829 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 DLG4P78352 724 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 TXNL4AP83876 142 aaKnown RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 CXCL9Q07325 125 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 NKAPQ8N5F7 415 aaKnown RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 CD101Q93033 1021 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 WNT8BQ93098 351 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 COQ8BQ96D53 544 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 C3orf14Q9HBI5 128 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 GGA2Q9UJY4 613 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 SYNPO2Q9UMS6 1093 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 PAPSS1O43252 624 aaPredicted RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 EPHX1P07099 455 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 IL12AP29459 219 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 MAN2A2P49641 1150 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 EIF2S3LQ2VIR3 472 aaKnown RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 ALG1LQ6GMV1 187 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 CHST7Q9NS84 486 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 SEC14L3Q9UDX4 400 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 CORO2BQ9UQ03 480 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 SPATA31A1Q5TZJ5 1347 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 CYP3A4P08684 503 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 MCCD1P59942 119 aaPredicted RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 MRPS6P82932 125 aaKnown RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 UBXN2BQ14CS0 331 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 BROXQ5VW32 411 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 SLC9A9Q8IVB4 645 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 APLFQ8IW19 511 aaPredicted RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 RGS17Q9UGC6 210 aaPredicted RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 MRPS33Q9Y291 106 aaKnown RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.77□□□□□ -0.53
SHANK2-201ENST00000338508 ACTL7BQ9Y614 415 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 QRICH2Q9H0J4 1663 aa11.77□□□□□ -0.53
SHANK2-201ENST00000338508 AXLP30530 894 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ICAM3P32942 547 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 CAPGP40121 348 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 YAP1P46937 504 aaKnown RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SMIM11AP58511 58 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ENPEPQ07075 957 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 PTGES3Q15185 160 aaKnown RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SGCBQ16585 318 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 RGS21Q2M5E4 152 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 P4HA3Q7Z4N8 544 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ZNF410Q86VK4 478 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 AMER2Q8N7J2 671 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 HTRA1Q92743 480 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ADAM7Q9H2U9 754 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ARHGAP20Q9P2F6 1191 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 RBMX2Q9Y388 322 aaKnown RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 GLI2P10070 1586 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 AP2S1P53680 142 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 DEPDC4Q8N2C3 294 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 KLHL5Q96PQ7 755 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 NPAS2Q99743 824 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 LACRTQ9GZZ8 138 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ADGRE2Q9UHX3 823 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 AGO1Q9UL18 857 aaKnown RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ZNF490Q9ULM2 529 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 EME2A4GXA9 379 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SUV39H1O43463 412 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 CYB5AP00167 134 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 LRP8Q14114 963 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 WDR59Q6PJI9 974 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 C7orf57Q8NEG2 295 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 TBCBQ99426 244 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 CHIAQ9BZP6 476 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SEMA3GQ9NS98 782 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 CFAP97Q9P2B7 532 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 KCNE2Q9Y6J6 123 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 A0A1W2PQ67 120 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 FGF10O15520 208 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 AKAP8O43823 692 aaKnown RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 PTPRAP18433 802 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms