RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 USP53Q70EK8 1073 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 BBS5Q8N3I7 341 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 ATL2Q8NHH9 583 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 ARRDC2Q8TBH0 407 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 KCNE4Q8WWG9 221 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 DTD2Q96FN9 168 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 GFM1Q96RP9 751 aaKnown RBP13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 FRMD8Q9BZ67 464 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 SUFUQ9UMX1 484 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 PPIL1Q9Y3C6 166 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 TTLL3Q9Y4R7 772 aa13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 PCYT1BQ9Y5K3 369 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-201ENST00000338427 TCEA3O75764 348 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 CLDN7O95471 211 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 SOD1P00441 154 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 JCHAINP01591 159 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 HLA-DQB2P05538 268 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 H2AFZP0C0S5 128 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 KRT10P13645 584 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 KDELR1P24390 212 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 SERPINB6P35237 376 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 CDK3Q00526 305 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 B4GALNT1Q00973 533 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 SRSF6Q13247 344 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 ARHGEF7Q14155 803 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 HLTFQ14527 1009 aaKnown RBP eCLIP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 TGIF1Q15583 401 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 LRRC66Q68CR7 880 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 RAET1GQ6H3X3 334 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 NPNTQ6UXI9 565 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 H2AFVQ71UI9 128 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 MARK2Q7KZI7 788 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 RAB11FIP2Q7L804 512 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 GPR155Q7Z3F1 870 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 CCNJLQ8IV13 435 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 FBXO39Q8N4B4 442 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 WDR36Q8NI36 951 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 GPBAR1Q8TDU6 330 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 SLC39A7Q92504 469 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 MAML1Q92585 1016 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 MCCC1Q96RQ3 725 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 SEMA6CQ9H3T2 930 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 PHPT1Q9NRX4 125 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 SPTLC3Q9NUV7 552 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 PRKAB1Q9Y478 270 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 HYOU1Q9Y4L1 999 aa13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-201ENST00000338427 BAHCC1Q9P281 2608 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 INPP4BO15327 924 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 EFSO43281 561 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 C1QL1O75973 258 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 ECEL1O95672 775 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 MMP2P08253 660 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 MYCLP1P12525 358 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 TNNT1P13805 278 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 CCNB1P14635 433 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 ITIH1P19827 911 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 KELP23276 732 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 CCNCP24863 283 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 UGT1A5P35504 534 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 ADCY8P40145 1251 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 ETV5P41161 510 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 GPR1P46091 355 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 INHBCP55103 352 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 CTBSQ01459 385 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 LLGL1Q15334 1064 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 SLC18A3Q16572 532 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 IFI16Q16666 785 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 AMZ1Q400G9 498 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 CERCAMQ5T4B2 595 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 ZFYVE27Q5T4F4 411 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 SLC30A9Q6PML9 568 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 KDELC2Q7Z4H8 507 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 ARL14Q8N4G2 192 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 CNTD1Q8N815 330 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 RNF214Q8ND24 703 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 CCNYQ8ND76 341 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 OR8K1Q8NGG5 319 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 SLC35G2Q8TBE7 412 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 ZDHHC1Q8WTX9 485 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 TSGA13Q96PP4 275 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 RNF157Q96PX1 679 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 WDR24Q96S15 920 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 UBL7Q96S82 380 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 RIOK2Q9BVS4 552 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 RDH14Q9HBH5 336 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 THSD1Q9NS62 852 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 DTLQ9NZJ0 730 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 TAAR2Q9P1P5 351 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 RCOR3Q9P2K3 495 aaPredicted RBP13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 PCDHGA8Q9Y5G5 932 aa13.33□□□□□ -0.28
NUDCD3-201ENST00000338427 A0A0J9YYE9 177 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms