RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SMAD6O43541 496 aaKnown RBP23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 FOXA1P55317 472 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 ASPHQ12797 758 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 TBCCQ15814 346 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 C5orf22Q49AR2 442 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 SETMARQ53H47 684 aaPredicted RBP23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 PAQR3Q6TCH7 311 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 RNF111Q6ZNA4 994 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 GK5Q6ZS86 529 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 OTOP2Q7RTS6 562 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 APCDD1Q8J025 514 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 CMTM5Q96DZ9 223 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 CPQQ9Y646 472 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 TEX28O15482 410 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 F11P03951 625 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 CA5AP35218 305 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 ZNF140P52738 457 aaPredicted RBP23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 NME5P56597 212 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 PFKFB4Q16877 469 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 DCBLD1Q8N8Z6 715 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 FAM156AQ8NDB6 213 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 EID2BQ96D98 161 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 PCDHB9Q9Y5E1 797 aa23.1■■□□□ 1.29
CLPTM1-201ENST00000337392 CIB2O75838 187 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 CD1DP15813 335 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 CSKP41240 450 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 STC1P52823 247 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 PRKAA2P54646 552 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 ACTR3P61158 418 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 TNK2Q07912 1038 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 ANKRD33Q7Z3H0 272 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 OR9I1Q8NGQ6 314 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 GSTO2Q9H4Y5 243 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 SARS2Q9NP81 518 aaKnown RBP23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 SORCS3Q9UPU3 1222 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 TANC1Q9C0D5 1861 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 BNIP3LO60238 219 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 NIPSNAP2O75323 286 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 H2AFYO75367 372 aaKnown RBP23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 WISP3O95389 354 aaPredicted RBP23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 DPP6P42658 865 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 DSG1Q02413 1049 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 CYHR1Q6ZMK1 362 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 LRRC74BQ6ZQY2 392 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 REM2Q8IYK8 340 aaPredicted RBP23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 SLC39A11Q8N1S5 342 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 ARHGAP24Q8N264 748 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 SLC26A7Q8TE54 656 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 SCG3Q8WXD2 468 aaKnown RBP23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 TOP1MTQ969P6 601 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 C3orf30Q96M34 536 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 C1orf21Q9H246 121 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 PRUNE2Q8WUY3 3088 aa23.09■■□□□ 1.29
CLPTM1-201ENST00000337392 ZNF37AP17032 561 aaPredicted RBP23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 TCN1P20061 433 aaPredicted RBP23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 FDXRP22570 491 aa23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 ECT2LQ008S8 904 aa23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 MUM1Q2TAK8 710 aa23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 ACAD11Q709F0 780 aa23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 MYLIPQ8WY64 445 aa23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 NAF1Q96HR8 494 aaKnown RBP23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 INSL5Q9Y5Q6 135 aa23.08■■□□□ 1.29
CLPTM1-201ENST00000337392 ENO3P13929 434 aaPredicted RBP23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 ACVR1Q04771 509 aa23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 SLC34A1Q06495 639 aa23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 PDAP1Q13442 181 aaKnown RBP23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 ACAP2Q15057 778 aa23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 KLC3Q6P597 504 aa23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 CAMK1DQ8IU85 385 aa23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 PTGR2Q8N8N7 351 aaPredicted RBP23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 PDZD8Q8NEN9 1154 aa23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 HMGCLL1Q8TB92 370 aa23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 RPL10LQ96L21 214 aaKnown RBP23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 ZNF558Q96NG5 402 aa23.08■■□□□ 1.28
CLPTM1-201ENST00000337392 ILVBLA1L0T0 632 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 CCNIQ14094 377 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 MRNIPQ6NTE8 343 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 GAREM2Q75VX8 874 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 PIWIL4Q7Z3Z4 852 aaKnown RBP23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 NET1Q7Z628 596 aaPredicted RBP23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 PLD4Q96BZ4 506 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 CDC7O00311 574 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 RHOBTB1O94844 696 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 CLNS1AP54105 237 aaKnown RBP23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 IRX1P78414 480 aaPredicted RBP23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 ZRANB3Q5FWF4 1079 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 SIDT2Q8NBJ9 832 aaKnown RBP23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 MYRFLQ96LU7 910 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 GPR21Q99679 349 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 FEM1AQ9BSK4 669 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 VPS51Q9UID3 782 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 TBX21Q9UL17 535 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 POMPQ9Y244 141 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 TBC1D30Q9Y2I9 924 aa23.07■■□□□ 1.28
CLPTM1-201ENST00000337392 ANKRD66B4E2M5 251 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 MYL4P12829 197 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 MTHFD2P13995 350 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 GABRR2P28476 465 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 MC4RP32245 332 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms