RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 MLNP12872 115 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 CRABP2P29373 138 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 MTPNP58546 118 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 RAD51Q06609 339 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 SREBF2Q12772 1141 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 INPP5AQ14642 412 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 FAM110CQ1W6H9 321 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 CNPY1Q3B7I2 92 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 GPR107Q5VW38 600 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 FBXL22Q6P050 247 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 GCNT7Q6ZNI0 430 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 PIWIL4Q7Z3Z4 852 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 GRIN3AQ8TCU5 1115 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 JADE3Q92613 823 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 FAM162AQ96A26 154 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 PPP1R10Q96QC0 940 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 KCTD14Q9BQ13 255 aaPredicted RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 CATSPERZQ9NTU4 200 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 TAS2R13Q9NYV9 303 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 CNTN3Q9P232 1028 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 PCDHGB4Q9UN71 923 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 TDRKHQ9Y2W6 561 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 TCAF1Q9Y4C2 921 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 PCDHGB5Q9Y5G0 923 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 A0A1B0GTW7 788 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 RBM47A0AV96 593 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 CCDC162PA2VCL2 907 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 A8MT66 165 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 OR1I1O60431 355 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 SNAP91O60641 907 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 WFS1O76024 890 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 CPSF4O95639 269 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 CRTAMO95727 393 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 FYNP06241 537 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 GLUD2P49448 558 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 DGKEP52429 567 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 DGKQP52824 942 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 C1QTNF8P60827 252 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 USP46P62068 366 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 C2orf73Q8N5S3 287 aaPredicted RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 SIDT2Q8NBJ9 832 aaKnown RBP8.23□□□□□ -1.09
HPS4-201ENST00000336873 ELMO1Q92556 727 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.23□□□□□ -1.09
HPS4-201ENST00000336873 TNKS2Q9H2K2 1166 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 SPAG4Q9NPE6 437 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 WDR70Q9NW82 654 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 IGSF9Q9P2J2 1179 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 GABRQQ9UN88 632 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 PSMD13Q9UNM6 376 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 BRWD1Q9NSI6 2320 aa8.23□□□□□ -1.09
HPS4-201ENST00000336873 COL2A1P02458 1487 aaPredicted RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 C1orf232A0A0U1RR37 186 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 CCDC154A6NI56 674 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 IRAK2O43187 625 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 SEC22BO75396 215 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 OR4F21O95013 312 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 F2P00734 622 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 SERPIND1P05546 499 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ALPIP09923 528 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 GABRB3P28472 473 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 RPL38P63173 70 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 TUSC3Q13454 348 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 ARHGEF6Q15052 776 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 TLR1Q15399 786 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 MAPRE1Q15691 268 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 MAPK11Q15759 364 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 CARTPTQ16568 116 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 SPRYD7Q5W111 196 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 C11orf96Q7Z7L8 435 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 DBF4BQ8NFT6 615 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 TSPAN14Q8NG11 270 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 SNX19Q92543 992 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 RMND5BQ96G75 393 aaPredicted RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 LRCH3Q96II8 777 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 FEM1CQ96JP0 617 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 DHRS4Q9BTZ2 278 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 WDR6Q9NNW5 1121 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 NSMCE4AQ9NXX6 385 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 EIF2B4Q9UI10 523 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 CD84Q9UIB8 345 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 FKBPLQ9UIM3 349 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 FCF1Q9Y324 198 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 MATN2O00339 956 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 DPYSL4O14531 572 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 DCLK1O15075 740 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 CLASP2O75122 1294 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 VPS26AO75436 327 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 RNASEH2AO75792 299 aaKnown RBP8.22□□□□□ -1.09
HPS4-201ENST00000336873 ALBP02768 609 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 TSHRP16473 764 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 PPP3CCP48454 512 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 SLC18A1P54219 525 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 FOXA1P55317 472 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 HMGCS1Q01581 520 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 GHRHRQ02643 423 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 PRKCZQ05513 592 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 LAPTM5Q13571 262 aa8.22□□□□□ -1.09
HPS4-201ENST00000336873 FOXB2Q5VYV0 432 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms