RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TRADDQ15628 312 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 WSCD2Q2TBF2 565 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 CYP2U1Q7Z449 544 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 RAVER1Q8IY67 606 aaKnown RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 NRSN1Q8IZ57 195 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 TP53I13Q8NBR0 393 aaPredicted RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 PPHLN1Q8NEY8 458 aaKnown RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 PIGKQ92643 395 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 CENPTQ96BT3 561 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 SLC6A18Q96N87 628 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 RANBP9Q96S59 729 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 ABCG8Q9H221 673 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 EPB41L5Q9HCM4 733 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 MBNL1Q9NR56 388 aaKnown RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 GRHL1Q9NZI5 618 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 IL17CQ9P0M4 197 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 DMGDHQ9UI17 866 aaKnown RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 SMG5Q9UPR3 1016 aaKnown RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 CA5BQ9Y2D0 317 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 PKP3Q9Y446 797 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 SLCO1B1Q9Y6L6 691 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 CCDC78A2IDD5 438 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 HEATR9A2RTY3 570 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 RGSL1A5PLK6 1076 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 TP73O15350 636 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 STX7O15400 261 aaKnown RBP14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 SLU7O95391 586 aaKnown RBP14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 PCCBP05166 539 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 RHOXF2BP0C7M4 288 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 BPIP17213 487 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 ADRA1DP25100 572 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 ZNF140P52738 457 aaPredicted RBP14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 DRG2P55039 364 aaKnown RBP14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 CLDN2P57739 230 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 TMPRSS15P98073 1019 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 PDE1BQ01064 536 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 LAMB3Q13751 1172 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 STAT4Q14765 748 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 IRF4Q15306 451 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 PCID2Q5JVF3 399 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 TEX35Q5T0J7 233 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 FNBP1LQ5T0N5 605 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 ALS2CLQ60I27 953 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 ZCCHC9Q8N567 271 aaKnown RBP14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 GPR26Q8NDV2 337 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 DENND6BQ8NEG7 585 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 OR4K2Q8NGD2 314 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 SCAMP4Q969E2 229 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 AP2M1Q96CW1 435 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 LOXL4Q96JB6 756 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 PWWP2AQ96N64 755 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 KLF6Q99612 283 aaPredicted RBP14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 RHOXF2Q9BQY4 288 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 FRMD8Q9BZ67 464 aaPredicted RBP14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 IL22Q9GZX6 179 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 FAM83DQ9H4H8 585 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 AASDHPPTQ9NRN7 309 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 RAD18Q9NS91 495 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 SYBUQ9NX95 663 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 KCTD5Q9NXV2 234 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 PILRBQ9UKJ0 227 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 TCAF1Q9Y4C2 921 aa14.05□□□□□ -0.16
APOBEC3B-202ENST00000335760 SPAG17Q6Q759 2223 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 USP34Q70CQ2 3546 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 MROH6A6NGR9 719 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 SDR42E2A6NKP2 422 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 BHMG1C9JSJ3 638 aaPredicted RBP14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 FPGTO14772 594 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 EPN2O95208 641 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 IGFALSP35858 605 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 NBL1P41271 181 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 MAGEA3P43357 314 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 PLTPP55058 493 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 CAV1Q03135 178 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 DNAJC21Q5F1R6 531 aaKnown RBP14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 TSTD2Q5T7W7 516 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 LAIR1Q6GTX8 287 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 CASC4Q6P4E1 433 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 ZNF765Q7L2R6 523 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 PELI3Q8N2H9 469 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 MPP5Q8N3R9 675 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 SUMF1Q8NBK3 374 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 PLA2G15Q8NCC3 412 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 OR13C4Q8NGS5 318 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 STYXQ8WUJ0 223 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 SEC14L1Q92503 715 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 ART4Q93070 314 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 DNAJC1Q96KC8 554 aaKnown RBP14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 RIOK2Q9BVS4 552 aaKnown RBP14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 TM9SF3Q9HD45 589 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 CHRAC1Q9NRG0 131 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 FAM114A2Q9NRY5 505 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 TMEM74BQ9NUR3 256 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 FNDC3AQ9Y2H6 1198 aaKnown RBP14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 HS3ST3A1Q9Y663 406 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 SCN8AQ9UQD0 1980 aa14.04□□□□□ -0.16
APOBEC3B-202ENST00000335760 H0Y8X5 98 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 CCL22O00626 93 aa14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 BCAT2O15382 392 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3B-202ENST00000335760 PPFIA2O75334 1257 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms