RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ABCG1P45844 678 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 BRD3Q15059 726 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 CENPUQ71F23 418 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 C1orf210Q8IVY1 113 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 CBARPQ8N350 705 aaPredicted RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 KIFC1Q9BW19 673 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A7Q9HAW7 530 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A10Q9HAW8 530 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A8Q9HAW9 530 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 PRMT8Q9NR22 394 aaPredicted RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 MBNL1Q9NR56 388 aaKnown RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 MARCH4Q9P2E8 410 aaPredicted RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 SOX13Q9UN79 622 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 KMT2EQ8IZD2 1858 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3DA0A087WVF3 549 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3IA0A087WXS9 549 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3EA0A087X179 549 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3KA0A087X1G2 549 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 A0A1W2PQU0 124 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3FA6NER0 549 aaPredicted RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3LB9A6J9 549 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 PPFIA2O75334 1257 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 C1QAP02745 245 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 ELFN1P0C7U0 828 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3HP0C7X1 549 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 AVPR2P30518 371 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 STC1P52823 247 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 RPL26P61254 145 aaKnown RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 PEX6Q13608 980 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 CRYMQ14894 314 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 ANKRD20A4Q4UJ75 823 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 PCID2Q5JVF3 399 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 ZNF648Q5T619 568 aaPredicted RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 TSTD2Q5T7W7 516 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 KCTD16Q68DU8 428 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3GQ6DHY5 549 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3CQ6IPX1 549 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 FAM151BQ6UXP7 276 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 TBC1D3Q8IZP1 549 aaPredicted RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 DTWD2Q8NBA8 298 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 HDAC10Q969S8 669 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 GPR174Q9BXC1 333 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 IL22Q9GZX6 179 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 ZC3H7BQ9UGR2 993 aaKnown RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 TMPRSS11EQ9UL52 423 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 RPL26L1Q9UNX3 145 aaKnown RBP16.49■□□□□ 0.23
SHOX-201ENST00000334060 TRPM6Q9BX84 2022 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 CXorf49A8MYA2 514 aaPredicted RBP16.48■□□□□ 0.23
SHOX-201ENST00000334060 H0Y8X5 98 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 RECQL5O94762 991 aaPredicted RBP16.48■□□□□ 0.23
SHOX-201ENST00000334060 PAK4O96013 591 aaPredicted RBP16.48■□□□□ 0.23
SHOX-201ENST00000334060 ERVK-10P10266 1014 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A6P19224 532 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A1P22309 533 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A4P22310 534 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A3P35503 534 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A5P35504 534 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 NPY2RP49146 381 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 PGGT1BP53609 377 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 XIAPP98170 497 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 CAV1Q03135 178 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 ACOX1Q15067 660 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 TAF1AQ15573 450 aaPredicted RBP16.48■□□□□ 0.23
SHOX-201ENST00000334060 TTC31Q49AM3 519 aaPredicted RBP16.48■□□□□ 0.23
SHOX-201ENST00000334060 LAYNQ6UX15 382 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 OR2W6PQ8NHA6 318 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 PPP1R2P1Q96PQ5 205 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 FAM107BQ9H098 131 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 IL26Q9NPH9 171 aa16.48■□□□□ 0.23
SHOX-201ENST00000334060 WSB2Q9NYS7 404 aaPredicted RBP16.48■□□□□ 0.23
SHOX-201ENST00000334060 CCDC162PA2VCL2 907 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 MYO1CO00159 1063 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 RNGTTO60942 597 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 VAPBO95292 243 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 SOD1P00441 154 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 SHBGP04278 402 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 IGHV4-34P06331 123 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 ADRA1DP25100 572 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 MAOBP27338 520 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 HMGCLP35914 325 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 ARCN1P48444 511 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 CCR3P51677 355 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 POLR2LP62875 67 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 SARNPP82979 210 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 TMEM52BQ4KMG9 183 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 ZNF789Q5FWF6 425 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 ERAP2Q6P179 960 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 ARMCX6Q7L4S7 300 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 TECPR1Q7Z6L1 1165 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 TMEM135Q86UB9 458 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 PIANPQ8IYJ0 282 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 PPHLN1Q8NEY8 458 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 PYROXD1Q8WU10 500 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 HNRNPLLQ8WVV9 542 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 MRRFQ96E11 262 aaKnown RBP16.47■□□□□ 0.23
SHOX-201ENST00000334060 COQ10AQ96MF6 247 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 FADS2P1A8MWK0 482 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 AXIN1O15169 862 aa16.47■□□□□ 0.23
SHOX-201ENST00000334060 SLC31A1O15431 190 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 497.6 ms