RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PFDN4Q9NQP4 134 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 VWA7Q9Y334 891 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 CCL22O00626 93 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 PIP5K1BO14986 540 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 MAFKO60675 156 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 ZNF182P17025 639 aaPredicted RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 TNK2Q07912 1038 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 RPS6KA2Q15349 733 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 CYBRD1Q53TN4 286 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 DCDC5Q6ZRR9 648 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 OR52K2Q8NGK3 314 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 LRRC58Q96CX6 371 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 CDCA5Q96FF9 252 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 PRKD2Q9BZL6 878 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 RNF181Q9P0P0 153 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 COQ6Q9Y2Z9 468 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 NOL3O60936 208 aaKnown RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 SIX3O95343 332 aaPredicted RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 SNAP29O95721 258 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 KCNE1P15382 129 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 NCK1P16333 377 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 LEPRP48357 1165 aaKnown RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 ZNF135P52742 658 aaPredicted RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 FOXA1P55317 472 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 ZNF33AQ06730 810 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 ATP1A4Q13733 1029 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 NANOGP8Q6NSW7 305 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 RANBP10Q6VN20 620 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 ISCA2Q86U28 154 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 ZNF354CQ86Y25 554 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 CCDC117Q8IWD4 279 aaPredicted RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 DNAJB14Q8TBM8 379 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 CALML6Q8TD86 181 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 SH3RF2Q8TEC5 729 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 SEZ6LQ9BYH1 1024 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 MID1IP1Q9NPA3 183 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 GID8Q9NWU2 228 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 PCDHGA4Q9Y5G9 962 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 V9GYQ6 96 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 J3QRK9 145 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 SNAP91O60641 907 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 DARSP14868 501 aaKnown RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 RPS9P46781 194 aaKnown RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 CDKN2DP55273 166 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 TRAF2Q12933 501 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 ARRDC4Q8NCT1 418 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 FBXL8Q96CD0 374 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 SLC39A8Q9C0K1 460 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 ADARB2Q9NS39 739 aaKnown RBP23.61■■□□□ 1.37
TSKU-201ENST00000333090 SELENONQ9NZV5 590 aa23.61■■□□□ 1.37
TSKU-201ENST00000333090 TTC24A2A3L6 582 aaPredicted RBP23.6■■□□□ 1.37
TSKU-201ENST00000333090 MATN3O15232 486 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 COQ9O75208 318 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 CAPN15O75808 1086 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 APLP1P51693 650 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 RELAQ04206 551 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 RABL3Q5HYI8 236 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 ANKRD26P1Q6NSI1 321 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 TERB1Q8NA31 727 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 OR6P1Q8NGX9 317 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 TWIST2Q8WVJ9 160 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 TANKQ92844 425 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.6■■□□□ 1.371e-7■■■■■ 35.3
TSKU-201ENST00000333090 TUBGCP3Q96CW5 907 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 L3HYPDHQ96EM0 354 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 MTG1Q9BT17 334 aaPredicted RBP23.6■■□□□ 1.37
TSKU-201ENST00000333090 NDFIP2Q9NV92 336 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 PKD2L2Q9NZM6 624 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 LRRC14BA6NHZ5 514 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 INHBBP09529 407 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 ZNF12P17014 697 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 EEF1B2P24534 225 aaKnown RBP23.6■■□□□ 1.37
TSKU-201ENST00000333090 MAP4P27816 1152 aaKnown RBP23.6■■□□□ 1.37
TSKU-201ENST00000333090 BMXP51813 675 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 HERVK_113P63132 956 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 KCNA7Q96RP8 456 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 ERVK-6Q9BXR3 956 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 MROH8Q9H579 483 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 ZNF408Q9H9D4 720 aa23.6■■□□□ 1.37
TSKU-201ENST00000333090 ANKRD12Q6UB98 2062 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 FUOMA2VDF0 154 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 GABRDO14764 452 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 CDK14O94921 469 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 SLC4A1P02730 911 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 GPIP06744 558 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 FCGR1AP12314 374 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 BDNFP23560 247 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 RFC2P35250 354 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 WNT3AP56704 352 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 GRAMD4Q6IC98 578 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 BHLHA9Q7RTU4 235 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 ZC3H7AQ8IWR0 971 aaKnown RBP23.59■■□□□ 1.37
TSKU-201ENST00000333090 CENPSQ8N2Z9 138 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 TMEM40Q8WWA1 233 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 PTERQ96BW5 349 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 K7EPI3 171 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 CLASP2O75122 1294 aaKnown RBP23.59■■□□□ 1.37
TSKU-201ENST00000333090 C7P10643 843 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 HGFP14210 728 aa23.59■■□□□ 1.37
TSKU-201ENST00000333090 FUT11Q495W5 492 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms