RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 THOP1P52888 689 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 ETF1P62495 437 aaKnown RBP15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 IL9RQ01113 521 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 TPRG1LQ5T0D9 272 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 ESRP1Q6NXG1 681 aaKnown RBP15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 RANBP10Q6VN20 620 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 DCP2Q8IU60 420 aaKnown RBP15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 KLHDC8BQ8IXV7 354 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 PELI3Q8N2H9 469 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 PDCD7Q8N8D1 485 aaKnown RBP15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 BLOC1S5Q8TDH9 187 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 SRPK1Q96SB4 655 aaKnown RBP15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 ELF4Q99607 663 aaPredicted RBP15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 LRRC40Q9H9A6 602 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 RAB6BQ9NRW1 208 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 GPR27Q9NS67 375 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 DNAAF2Q9NVR5 837 aaKnown RBP15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 PKD2L2Q9NZM6 624 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 E7EVH7 732 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 TOR1BO14657 336 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 AURKAO14965 403 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 PHF2O75151 1096 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 CASQ1P31415 396 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 RPL22P35268 128 aaKnown RBP15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 COILP38432 576 aaPredicted RBP15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 LMAN1P49257 510 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 CCT8P50990 548 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 YPEL5P62699 121 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 CYP1B1Q16678 543 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 KCTD19Q17RG1 926 aaPredicted RBP15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 HS1BP3Q53T59 392 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 KCTD11Q693B1 232 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 RAET1GQ6H3X3 334 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 PNCKQ6P2M8 343 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 CCDC137Q6PK04 289 aaKnown RBP15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 SYT10Q6XYQ8 523 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 NRSN1Q8IZ57 195 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 OXR1Q8N573 874 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 ATL2Q8NHH9 583 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 SCAMP4Q969E2 229 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 AP2M1Q96CW1 435 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 APOOQ9BUR5 198 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 ABCG8Q9H221 673 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 WDR26Q9H7D7 661 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 ERVMER34-1Q9H9K5 563 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 ETNK1Q9HBU6 452 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 TM7SF3Q9NS93 570 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 HACD3Q9P035 362 aa15.86■□□□□ 0.13
CCDC28A-201ENST00000332797 SPTY2D1-AS1A0A0U1RR47 76 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 A0A1B0GTQ1 180 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 PSMD3O43242 534 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 DFNA5O60443 496 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 AP2A1O95782 977 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 TSHRP16473 764 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 SPINT3P49223 89 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 ARRB1P49407 418 aaPredicted RBP15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 DPTQ07507 201 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 PTK2BQ14289 1009 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 FZD2Q14332 565 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 TRIP13Q15645 432 aaPredicted RBP15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 ZNF542PQ5EBM4 170 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 ZNF765Q7L2R6 523 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 GLT6D1Q7Z4J2 308 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 TMC3Q7Z5M5 1100 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 PARGQ86W56 976 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 CREG2Q8IUH2 290 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 EID2BQ96D98 161 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 RIOK2Q9BVS4 552 aaKnown RBP15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 TRABDQ9H4I3 376 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 DNAJC28Q9NX36 388 aa15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.85■□□□□ 0.13
CCDC28A-201ENST00000332797 CACNB4O00305 520 aaPredicted RBP15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 SLC30A4O14863 429 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 GPR1P46091 355 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 SEMA5AQ13591 1074 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 NFATC4Q14934 902 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 ALS2CLQ60I27 953 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 DENND5AQ6IQ26 1287 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 MACC1Q6ZN28 852 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 RAVER1Q8IY67 606 aaKnown RBP15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 TTC30BQ8N4P2 665 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 FUBP1Q96AE4 644 aaKnown RBP15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 FAM83DQ9H4H8 585 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 BPIFA1Q9NP55 256 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 RGSL1A5PLK6 1076 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 ERI2A8K979 691 aaKnown RBP15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 YKT6O15498 198 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 BUD23O43709 281 aaKnown RBP15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 ZNF883P0CG24 379 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 SDHBP21912 280 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 HTR1BP28222 390 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 EPHA8P29322 1005 aaPredicted RBP15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 TRIM23P36406 574 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 FNTAP49354 379 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 VPS41P49754 854 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 KIAA1024LP59773 190 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 BASP1P80723 227 aaKnown RBP15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 SLC14A1Q13336 389 aa15.84■□□□□ 0.13
CCDC28A-201ENST00000332797 SHBQ15464 509 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms