RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ZNF623O75123 536 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 TIPRLO75663 272 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 H6PDO95479 791 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 MYCP01106 439 aaPredicted RBP15.36■□□□□ 0.05
BRCC3-201ENST00000330045 ITGB1P05556 798 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 RHOQP17081 205 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 GRIA3P42263 894 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 USP46P62068 366 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 TUSC3Q13454 348 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 IRAK1BP1Q5VVH5 260 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 KRT80Q6KB66 452 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 ZBTB49Q6ZSB9 765 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 RETREG3Q86VR2 466 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 RYBPQ8N488 228 aaPredicted RBP15.36■□□□□ 0.05
BRCC3-201ENST00000330045 TRIML2Q8N7C3 387 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 OR2T34Q8NGX1 318 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 OR2T3Q8NH03 318 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 CANT1Q8WVQ1 401 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 PSMG2Q969U7 264 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 CCT7Q99832 543 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 ZYG11BQ9C0D3 744 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 DDX18Q9NVP1 670 aaKnown RBP15.36■□□□□ 0.05
BRCC3-201ENST00000330045 SRRDQ9UH36 339 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 DNAJC15Q9Y5T4 150 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 H3BSA7 217 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 LDB2O43679 373 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 CNTN5O94779 1100 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 TMCC1O94876 653 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 CD1DP15813 335 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 CD52P31358 61 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 SLC39A13Q96H72 371 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 TBATAQ96M53 351 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 ASB2Q96Q27 587 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 CAAP1Q9H8G2 361 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 PRDM5Q9NQX1 630 aaPredicted RBP15.36■□□□□ 0.05
BRCC3-201ENST00000330045 ARMC1Q9NVT9 282 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 GMPR2Q9P2T1 348 aaKnown RBP15.36■□□□□ 0.05
BRCC3-201ENST00000330045 THSD7BQ9C0I4 1608 aa15.36■□□□□ 0.05
BRCC3-201ENST00000330045 TTC3P53804 2025 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 NR5A2O00482 541 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 HTRA2O43464 458 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 AKAP10O43572 662 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 CDK14O94921 469 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 FGF4P08620 206 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 OR4Q2P0C623 313 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 SLC2A3P11169 496 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 ZNF23P17027 643 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 CKMT2P17540 419 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 FDXRP22570 491 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 NME5P56597 212 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 MGAT3Q09327 533 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 GEN1Q17RS7 908 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 PABPC1LQ4VXU2 614 aaKnown RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 LRRC23Q53EV4 343 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 ALFQ53S48 1182 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 ZNF683Q8IZ20 524 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 PTGR2Q8N8N7 351 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 ANKFN1Q8N957 763 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 EZH1Q92800 747 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 LRCH3Q96II8 777 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 SUSD3Q96L08 255 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 HOPXQ9BPY8 73 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 GPATCH1Q9BRR8 931 aaKnown RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 PNPLA3Q9NST1 481 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 POLR3BQ9NW08 1133 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 TMEM248Q9NWD8 314 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 MAP10Q9P2G4 905 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 PADI3Q9ULW8 664 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 MYRFQ9Y2G1 1151 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 NDUFAF1Q9Y375 327 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 CEPT1Q9Y6K0 416 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 MYO16Q9Y6X6 1858 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 F8W810 466 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 PDLIM1O00151 329 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 PPP6CO00743 305 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 GLP2RO95838 553 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 BMP2P12643 396 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 CDH2P19022 906 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 ATP6V1B2P21281 511 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 TBX4P57082 545 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 YWHAHQ04917 246 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 MS4A13Q5J8X5 152 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 PPP4R4Q6NUP7 873 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 ZNF549Q6P9A3 640 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 RAB44Q7Z6P3 723 aaPredicted RBP15.35■□□□□ 0.05
BRCC3-201ENST00000330045 MON1AQ86VX9 555 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 TEX26Q8N6G2 289 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 B4GALNT2Q8NHY0 566 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 ARRDC2Q8TBH0 407 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 ZUFSPQ96AP4 578 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 IL1RL2Q9HB29 575 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 MID1IP1Q9NPA3 183 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 OLAHQ9NV23 265 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 TMCO1Q9UM00 188 aa15.35■□□□□ 0.05
BRCC3-201ENST00000330045 LOC285095A0A1B0GVY8 99 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 H3BNH8 94 aa15.34■□□□□ 0.05
BRCC3-201ENST00000330045 SIX3O95343 332 aaPredicted RBP15.34■□□□□ 0.05
BRCC3-201ENST00000330045 ATXN1LP0C7T5 689 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms