RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 HTRA2O43464 458 aaPredicted RBP20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 PAPLNO95428 1278 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 IGSF6O95976 241 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 FGF3P11487 239 aaPredicted RBP20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 CPA3P15088 417 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 CTPS1P17812 591 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 VIPR2P41587 438 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 NAA25Q14CX7 972 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 DBN1Q16643 649 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 MRNIPQ6NTE8 343 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 RYBPQ8N488 228 aaPredicted RBP20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 OR2AP1Q8NGE2 309 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 KCNV2Q8TDN2 545 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 VOPP1Q96AW1 172 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 PRR11Q96HE9 360 aaPredicted RBP20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 BPIFA1Q9NP55 256 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 SLCO3A1Q9UIG8 710 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 CRYL1Q9Y2S2 319 aa20.27■□□□□ 0.84
RIPPLY3-201ENST00000329553 SLC12A2P55011 1212 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 STX3Q13277 289 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 HECTD2Q5U5R9 776 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 ADIPOR2Q86V24 386 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 TMEM151AQ8N4L1 468 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 TTC8Q8TAM2 541 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 C7orf26Q96N11 449 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 LMAN2LQ9H0V9 348 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 MARK1Q9P0L2 795 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 VWA7Q9Y334 891 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 RFXAPO00287 272 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 SLC9A3R1O14745 358 aaPredicted RBP20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 GSC2O15499 205 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 ENTPD5O75356 428 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 ALPIP09923 528 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 MYL2P10916 166 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 COL6A2P12110 1019 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 MAPK8P45983 427 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 GRIA4P48058 902 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 OCRLQ01968 901 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 DLG1Q12959 904 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 SPATA6LQ8N4H0 392 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 MYLIPQ8WY64 445 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 NXNL1Q96CM4 212 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 SFXN1Q9H9B4 322 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 POLR3BQ9NW08 1133 aaPredicted RBP20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 HACD3Q9P035 362 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 MSRAQ9UJ68 235 aa20.26■□□□□ 0.83
RIPPLY3-201ENST00000329553 C2orf16Q68DN1 1984 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 G3V2L1 256 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 SNNO75324 88 aaPredicted RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 LMNAP02545 664 aaKnown RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 SNRPD1P62314 119 aaKnown RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 ECT2LQ008S8 904 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 ZBTB16Q05516 673 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 DHCR24Q15392 516 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 TMEM215Q68D42 235 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 C22orf39Q6P5X5 142 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 SDCCAG8Q86SQ7 713 aaPredicted RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 CFAP61Q8NHU2 1237 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 PPP1R14CQ8TAE6 165 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 ISG20Q96AZ6 181 aaKnown RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 EID2BQ96D98 161 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 GPR78Q96P69 363 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 APOL5Q9BWW9 433 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 IGFLR1Q9H665 355 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 DCLRE1BQ9H816 532 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 MAGEE1Q9HCI5 957 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 CPSF2Q9P2I0 782 aaKnown RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 FKBPLQ9UIM3 349 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 SLC25A13Q9UJS0 675 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 MYO9BQ13459 2157 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 STX7O15400 261 aaKnown RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 BNIP3LO60238 219 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 SBK3P0C264 359 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 OGNP20774 298 aaKnown RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 GLRBP48167 497 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 MYLK3Q32MK0 819 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 TRIM68Q6AZZ1 485 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 ZNF549Q6P9A3 640 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 AFTPHQ6ULP2 937 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 KIAA0907Q7Z7F0 614 aaPredicted RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 LCA5Q86VQ0 697 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 KIRREL3Q8IZU9 778 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 ZNF557Q8N988 423 aaPredicted RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 TSNARE1Q96NA8 513 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 ATP13A3Q9H7F0 1226 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 DUS2Q9NX74 493 aaKnown RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 KCNK4Q9NYG8 393 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 CDH22Q9UJ99 828 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 ZNF711Q9Y462 761 aa20.25■□□□□ 0.83
RIPPLY3-201ENST00000329553 SOCS5O75159 536 aa20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 KLHL2O95198 593 aa20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 STC1P52823 247 aa20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 CDKN2DP55273 166 aa20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 TAF11Q15544 211 aa20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 TYSND1Q2T9J0 566 aa20.24■□□□□ 0.83
RIPPLY3-201ENST00000329553 FAM78AQ5JUQ0 283 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms