RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SRPK1Q96SB4 655 aaKnown RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 C19orf43Q9BQ61 176 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 HEPHQ9BQS7 1158 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 SUV39H2Q9H5I1 410 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 MAGEE1Q9HCI5 957 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 IL1RAPL1Q9NZN1 696 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 HACD3Q9P035 362 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 PSMC3IPQ9P2W1 217 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 LIMD1Q9UGP4 676 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 CIDEBQ9UHD4 219 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 ZNF180Q9UJW8 692 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 HCN2Q9UL51 889 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 SPO11Q9Y5K1 396 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 WASF2Q9Y6W5 498 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 A0A0J9YYE9 177 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 EDDM13A0A1B0GTR0 161 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 TSPAN11A1L157 253 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 POC1B-GALNT4F8VUJ3 575 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 SPECC1L-ADORA2AF8WAN1 911 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 NPC1O15118 1278 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 SIN3BO75182 1162 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 CRTAMO95727 393 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 TRBC1P01850 177 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 PAMP19021 973 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 ARNTP27540 789 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 CTHP32929 405 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 TNFRSF4P43489 277 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 GALK1P51570 392 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 ZNF234Q14588 700 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 KPNB1Q14974 876 aaKnown RBP12.77□□□□□ -0.37
DDX39A-202ENST00000324340 SETDB1Q15047 1291 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 PDPK2PQ6A1A2 396 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 OR52E8Q6IFG1 317 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 ESRP1Q6NXG1 681 aaKnown RBP12.77□□□□□ -0.37
DDX39A-202ENST00000324340 SLC26A11Q86WA9 606 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 RALGPS2Q86X27 583 aaPredicted RBP12.77□□□□□ -0.37
DDX39A-202ENST00000324340 CNTN4Q8IWV2 1026 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 CHST14Q8NCH0 376 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 MDGA1Q8NFP4 955 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 OR13J1Q8NGT2 312 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 BLOC1S5Q8TDH9 187 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 PDCD6IPQ8WUM4 868 aaKnown RBP12.77□□□□□ -0.37
DDX39A-202ENST00000324340 CDKL2Q92772 493 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 FAM136AQ96C01 138 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 LYSMD1Q96S90 227 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 P2RY13Q9BPV8 354 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 TRABDQ9H4I3 376 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 ZDHHC6Q9H6R6 413 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 PHTF1Q9UMS5 762 aa12.77□□□□□ -0.37
DDX39A-202ENST00000324340 MAGEA13PA6NCF6 341 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 SMIM23A6NLE4 172 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 PEX11AO75192 247 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 PIAS1O75925 651 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 DCTN3O75935 186 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 PRKCGP05129 697 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 ERVK-10P10266 1014 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 VHLP40337 213 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 SOX9P48436 509 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 ZNF140P52738 457 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-202ENST00000324340 PDE1BQ01064 536 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 SEPT6Q14141 434 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 CNGA3Q16281 694 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 FNDC3BQ53EP0 1204 aaKnown RBP12.76□□□□□ -0.37
DDX39A-202ENST00000324340 SH2D4BQ5SQS7 431 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 C9orf64Q5T6V5 341 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-202ENST00000324340 GDPD4Q6W3E5 623 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 LCA5Q86VQ0 697 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 KCNMB4Q86W47 210 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 ZSWIM9Q86XI8 627 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 CTAGE3PQ8IX95 158 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 CYP4X1Q8N118 509 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 TTC30BQ8N4P2 665 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 PPM1NQ8N819 430 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 STYXQ8WUJ0 223 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 MAGEB18Q96M61 343 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 C8orf33Q9H7E9 229 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-202ENST00000324340 SUDS3Q9H7L9 328 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-202ENST00000324340 FBRSL1Q9HCM7 1045 aaKnown RBP12.76□□□□□ -0.37
DDX39A-202ENST00000324340 ATXN10Q9UBB4 475 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 SLC2A6Q9UGQ3 507 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 IL36AQ9UHA7 158 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 ARL5AQ9Y689 179 aa12.76□□□□□ -0.37
DDX39A-202ENST00000324340 BRWD1Q9NSI6 2320 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 CAPN8A6NHC0 703 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 K7EQS6 105 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 AURKAO14965 403 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 SLC7A4O43246 635 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 BNIP3LO60238 219 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 LEFTY1O75610 366 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 FAM155BO75949 473 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 UGT2B4P06133 528 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 CTSLP07711 333 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 PIRTP0C851 137 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 GLULP15104 373 aa12.75□□□□□ -0.37
DDX39A-202ENST00000324340 KIR2DL1P43626 348 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-202ENST00000324340 CLCN2P51788 898 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms