RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PTTG2Q9NZH5 202 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 PRDM4Q9UKN5 801 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 POLR3HQ9Y535 204 aaPredicted RBP16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 A0A0J9YYE9 177 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 TULP3O75386 442 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 IFNA16P05015 189 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 ALDH2P05091 517 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 HSPA14Q0VDF9 509 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 CHST15Q7LFX5 561 aaPredicted RBP16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 TSEN15Q8WW01 171 aaKnown RBP16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 FATE1Q969F0 183 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 F8VP50 259 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 PLOD2O00469 737 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 GSC2O15499 205 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 NRP2O60462 931 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 CRELD1Q96HD1 420 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 GPER1Q99527 375 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 LRATO95237 230 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 GALNT5Q7Z7M9 940 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 ADGRG2Q8IZP9 1017 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 PNMA5Q96PV4 448 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 CLDN25C9JDP6 229 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 MARCH2Q9P0N8 246 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 PRH1P02810 166 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 CRHR1P34998 444 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 RNF220Q5VTB9 566 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 USP43Q70EL4 1123 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 SPACA7Q96KW9 195 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 A0A0G2JPF8 293 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 DCDC2CA8MYV0 355 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 HNRNPCL3B7ZW38 293 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 IFNA7P01567 189 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 HNRNPCL4P0DMR1 293 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 EBNA1BP2Q99848 306 aaKnown RBP16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 PPATQ06203 517 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 TUBB3Q13509 450 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 TMEM165Q9HC07 324 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 MRTO4Q9UKD2 239 aaKnown RBP16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 RIIAD1A6NNX1 92 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 FADS2P1A8MWK0 482 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 XKRYO14609 159 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 KMOO15229 486 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 SVOPLQ8N434 492 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 PDP1Q9P0J1 537 aaPredicted RBP16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 BTRCQ9Y297 605 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 PLLPQ9Y342 182 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 CES1P23141 567 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 MANFP55145 182 aaKnown RBP16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 STYK1Q6J9G0 422 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 QSOX2Q6ZRP7 698 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 IFT46Q9NQC8 304 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 TAS2R7Q9NYW3 318 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 FABP3P05413 133 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 SAGP10523 405 aaPredicted RBP16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 GRIK4Q16099 956 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 CLNKQ7Z7G1 428 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 DEFB106AQ8N104 65 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 FDXACB1Q9BRP7 624 aaPredicted RBP16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 MAT2BQ9NZL9 334 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 MARK1Q9P0L2 795 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 SEC14L3Q9UDX4 400 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■□□ 15.6
SMCHD1-201ENST00000320876 PRKCIP41743 596 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 POLR2JP52435 117 aaKnown RBP16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 C1orf189Q5VU69 101 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 RTL4Q6ZR62 310 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 AGBL3Q8NEM8 1001 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 RIOX1Q9H6W3 641 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 SETD4Q9NVD3 440 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 AASSQ9UDR5 926 aa16.86■□□□□ 0.29
SMCHD1-201ENST00000320876 ZBTB11O95625 1053 aaPredicted RBP16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 SLC35C1Q96A29 364 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 TRAF6Q9Y4K3 522 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 LACTBL1A8MY62 500 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 ADAMDEC1O15204 470 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 CAP2P40123 477 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 RBM20Q5T481 1227 aaKnown RBP16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 ZNF697Q5TEC3 545 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 POTEHQ6S545 545 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 XPR1Q9UBH6 696 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 THOP1P52888 689 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 OSMRQ99650 979 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 MECRQ9BV79 373 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 BRD9Q9H8M2 597 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 AIREO43918 545 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 SIN3BO75182 1162 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 HUNKP57058 714 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 HECTD3Q5T447 861 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 TAPT1Q6NXT6 567 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 NIPA1Q7RTP0 329 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 ZNF548Q8NEK5 533 aaPredicted RBP16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 KIF1AQ12756 1690 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 MAZP56270 477 aaKnown RBP16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 LLGL2Q6P1M3 1020 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 RASAL3Q86YV0 1011 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms