RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TIMM22Q9Y584 194 aa17.41■□□□□ 0.38
COL9A1-201ENST00000320755 MYO16Q9Y6X6 1858 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 SUPT3HB4E1H0 165 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 NT5C1B-RDH14C9J2C7 533 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 SUPT3HO75486 399 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 PAPSS2O95340 614 aaPredicted RBP17.4■□□□□ 0.38
COL9A1-201ENST00000320755 CKMT2P17540 419 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 SCNN1BP51168 640 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 SERINC3Q13530 473 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 SLC5A9Q2M3M2 681 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 FAM45BPQ6NSW5 357 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 MRNIPQ6NTE8 343 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 RETREG3Q86VR2 466 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 MYO1HQ8N1T3 1032 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 FAM45AQ8TCE6 357 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 DIS3LQ8TF46 1054 aaKnown RBP17.4■□□□□ 0.38
COL9A1-201ENST00000320755 RANBP9Q96S59 729 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 POLR3BQ9NW08 1133 aaPredicted RBP17.4■□□□□ 0.38
COL9A1-201ENST00000320755 A0A0J9YYE9 177 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 C7orf72A4D263 438 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 SEPT4O43236 478 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 RHOBTB1O94844 696 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 OAZ2O95190 189 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 TFAP2AP05549 437 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 IFNEQ86WN2 208 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 CLYBLQ8N0X4 340 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 DCBLD1Q8N8Z6 715 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 OR4L1Q8NH43 312 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 SLC29A1Q99808 456 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 CRISPLD1Q9H336 500 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 SCN4AP35499 1836 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 PTPRDP23468 1912 aa17.4■□□□□ 0.38
COL9A1-201ENST00000320755 LOC285095A0A1B0GVY8 99 aa17.39■□□□□ 0.38
COL9A1-201ENST00000320755 ADAMTS4O75173 837 aa17.39■□□□□ 0.38
COL9A1-201ENST00000320755 CRCPO75575 148 aa17.39■□□□□ 0.38
COL9A1-201ENST00000320755 YBX1P67809 324 aaKnown RBP17.39■□□□□ 0.38
COL9A1-201ENST00000320755 NRG1Q02297 640 aaPredicted RBP17.39■□□□□ 0.38
COL9A1-201ENST00000320755 RBBP5Q15291 538 aaKnown RBP17.39■□□□□ 0.38
COL9A1-201ENST00000320755 PAQR3Q6TCH7 311 aa17.39■□□□□ 0.38
COL9A1-201ENST00000320755 RAB44Q7Z6P3 723 aaPredicted RBP17.39■□□□□ 0.38
COL9A1-201ENST00000320755 TICAM1Q8IUC6 712 aa17.39■□□□□ 0.38
COL9A1-201ENST00000320755 CATSPERZQ9NTU4 200 aa17.39■□□□□ 0.38
COL9A1-201ENST00000320755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.39■□□□□ 0.38
COL9A1-201ENST00000320755 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.39■□□□□ 0.38
COL9A1-201ENST00000320755 NLRC5Q86WI3 1866 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 AKAP10O43572 662 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 FAM58BPP0C7Q3 252 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 CASP2P42575 452 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 TIAL1Q01085 375 aaKnown RBP eCLIP17.39■□□□□ 0.37
COL9A1-201ENST00000320755 RHDQ02161 417 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 IL10RBQ08334 325 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 PTPRRQ15256 657 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 NADK2Q4G0N4 442 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 TWIST2Q8WVJ9 160 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 ZIC5Q96T25 663 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 GPR62Q9BZJ7 368 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 SUCOQ9UBS9 1254 aaKnown RBP17.39■□□□□ 0.37
COL9A1-201ENST00000320755 SNUPNO95149 360 aaKnown RBP17.39■□□□□ 0.37
COL9A1-201ENST00000320755 CDKN1CP49918 316 aaPredicted RBP17.39■□□□□ 0.37
COL9A1-201ENST00000320755 DUSP4Q13115 394 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 TRIP4Q15650 581 aaPredicted RBP17.39■□□□□ 0.37
COL9A1-201ENST00000320755 SLC14A2Q15849 920 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 AP1ARQ63HQ0 302 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 DHFR2Q86XF0 187 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 METTL25Q8N6Q8 603 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 CANT1Q8WVQ1 401 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 SLCO4A1Q96BD0 722 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 RPL10LQ96L21 214 aaKnown RBP17.39■□□□□ 0.37
COL9A1-201ENST00000320755 NACA2Q9H009 215 aa17.39■□□□□ 0.37
COL9A1-201ENST00000320755 DOCK4Q8N1I0 1966 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 SCAMP3O14828 347 aaKnown RBP17.38■□□□□ 0.37
COL9A1-201ENST00000320755 AZIN1O14977 448 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 TRIM24O15164 1050 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 IGHA2P01877 340 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 SERPINF2P08697 491 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 HGFP14210 728 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 ZNF26P17031 533 aaPredicted RBP17.38■□□□□ 0.37
COL9A1-201ENST00000320755 ZNF37AP17032 561 aaPredicted RBP17.38■□□□□ 0.37
COL9A1-201ENST00000320755 UGT1A6P19224 532 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 FDXRP22570 491 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 ARL1P40616 181 aaPredicted RBP17.38■□□□□ 0.37
COL9A1-201ENST00000320755 RPL5P46777 297 aaKnown RBP17.38■□□□□ 0.37
COL9A1-201ENST00000320755 GATMP50440 423 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 PRKCZQ05513 592 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 UGT3A2Q3SY77 523 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 NADSYN1Q6IA69 706 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 TEX26Q8N6G2 289 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 OR4K2Q8NGD2 314 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 C8orf48Q96LL4 319 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 TLR8Q9NR97 1041 aaKnown RBP17.38■□□□□ 0.37
COL9A1-201ENST00000320755 RNF112Q9ULX5 631 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 PDE4DIPQ5VU43 2346 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 FAM149AA5PLN7 773 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 TLR5O60602 858 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 CLASP2O75122 1294 aaKnown RBP17.38■□□□□ 0.37
COL9A1-201ENST00000320755 STAMBPO95630 424 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 SPATA31D3P0C874 917 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 PSMC3P17980 439 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 EEF1DP29692 281 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms