RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 SLC2A13Q96QE2 648 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 CENPOQ9BU64 300 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 ABHD16BQ9H3Z7 469 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 TMEM181Q9P2C4 612 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 IPO11Q9UI26 975 aaKnown RBP16.04■□□□□ 0.16
CRAT-201ENST00000318080 CDH7Q9ULB5 785 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 LRIG2O94898 1065 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 ELNP15502 786 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 NCK1P16333 377 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 ZNF12P17014 697 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 NPR3P17342 541 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 LRPAP1P30533 357 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 OPRL1P41146 370 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 HK2P52789 917 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 BEX3Q00994 111 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 FPGSQ05932 587 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 STX5Q13190 355 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 CMTR2Q8IYT2 770 aaKnown RBP16.04■□□□□ 0.16
CRAT-201ENST00000318080 MAGEE2Q8TD90 523 aaPredicted RBP16.04■□□□□ 0.16
CRAT-201ENST00000318080 TRIB2Q92519 343 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 DPF3Q92784 378 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 TCF12Q99081 682 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 RHOBTB2Q9BYZ6 727 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 OR12D3Q9UGF7 316 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 FBXW11Q9UKB1 542 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 TMED5Q9Y3A6 229 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 GPC6Q9Y625 555 aaPredicted RBP16.04■□□□□ 0.16
CRAT-201ENST00000318080 SOBPA7XYQ1 873 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 A8MT66 165 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 DFFAO00273 331 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 NPHS1O60500 1241 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 SNRPB2P08579 225 aaKnown RBP16.04■□□□□ 0.16
CRAT-201ENST00000318080 GALNT2Q10471 571 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 NIPAL1Q6NVV3 410 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 LDB1Q86U70 411 aaPredicted RBP16.04■□□□□ 0.16
CRAT-201ENST00000318080 ANKRD49Q8WVL7 239 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 HDAC11Q96DB2 347 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 MED10Q9BTT4 135 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 FICDQ9BVA6 458 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 PLEKHA5Q9HAU0 1116 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 RNF186Q9NXI6 227 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 EVLQ9UI08 416 aaPredicted RBP16.04■□□□□ 0.16
CRAT-201ENST00000318080 SARDHQ9UL12 918 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 USP22Q9UPT9 525 aa16.04■□□□□ 0.16
CRAT-201ENST00000318080 CCL22O00626 93 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 AQP9O43315 295 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 KDM1AO60341 852 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 PMPCBO75439 489 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 GPC4O75487 556 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 ALDOCP09972 364 aaKnown RBP16.03■□□□□ 0.16
CRAT-201ENST00000318080 SPIDRQ14159 915 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 SF3B4Q15427 424 aaKnown RBP eCLIP16.03■□□□□ 0.16
CRAT-201ENST00000318080 WSCD1Q658N2 575 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 SLC27A1Q6PCB7 646 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 PIWIL4Q7Z3Z4 852 aaKnown RBP16.03■□□□□ 0.16
CRAT-201ENST00000318080 OR6J1Q8NGC5 347 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 UHRF1Q96T88 793 aaPredicted RBP16.03■□□□□ 0.16
CRAT-201ENST00000318080 GID8Q9NWU2 228 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 CROTQ9UKG9 612 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 ERGIC3Q9Y282 383 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 TIMM13Q9Y5L4 95 aaPredicted RBP16.03■□□□□ 0.16
CRAT-201ENST00000318080 MAGED1Q9Y5V3 778 aaPredicted RBP16.03■□□□□ 0.16
CRAT-201ENST00000318080 ERI2A8K979 691 aaKnown RBP16.03■□□□□ 0.16
CRAT-201ENST00000318080 H3BRB1 525 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 NRP2O60462 931 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 XYLBO75191 536 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 ATP5F1P24539 256 aaPredicted RBP16.03■□□□□ 0.16
CRAT-201ENST00000318080 DCKP27707 260 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 PRKAA2P54646 552 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 SQLEQ14534 574 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 MAPK11Q15759 364 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 GRIK4Q16099 956 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 DUSP28Q4G0W2 176 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 NAPEPLDQ6IQ20 393 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 MRPL57Q9BQC6 102 aaKnown RBP16.03■□□□□ 0.16
CRAT-201ENST00000318080 KLHL25Q9H0H3 589 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 TKTL2Q9H0I9 626 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 NANOGQ9H9S0 305 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 MEAF6Q9HAF1 191 aa16.03■□□□□ 0.16
CRAT-201ENST00000318080 LAMA2P24043 3122 aaKnown RBP16.02■□□□□ 0.16
CRAT-201ENST00000318080 H0YJX3 145 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 TCEA1P23193 301 aaKnown RBP16.02■□□□□ 0.16
CRAT-201ENST00000318080 ALDH4A1P30038 563 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 HADHAP40939 763 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 CDH13P55290 713 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 IFITM3Q01628 133 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 SEPT6Q14141 434 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 KCNJ8Q15842 424 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 MOGQ16653 247 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 PCID2Q5JVF3 399 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 OTUD3Q5T2D3 398 aaPredicted RBP16.02■□□□□ 0.16
CRAT-201ENST00000318080 RWDD4Q6NW29 188 aaKnown RBP16.02■□□□□ 0.16
CRAT-201ENST00000318080 TBPL2Q6SJ96 375 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 IQCF2Q8IXL9 164 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 ARRDC4Q8NCT1 418 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 CD99L2Q8TCZ2 262 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 TRHDEQ9UKU6 1024 aa16.02■□□□□ 0.16
CRAT-201ENST00000318080 NME4O00746 187 aa16.02■□□□□ 0.15
CRAT-201ENST00000318080 MYF6P23409 242 aa16.02■□□□□ 0.15
CRAT-201ENST00000318080 RAD23AP54725 363 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms