RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 XPNPEP2O43895 674 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 NPM3O75607 178 aaKnown RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PGLSO95336 258 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ENO2P09104 434 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 COL6A2P12110 1019 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 SLC7A1P30825 629 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 MTHFRP42898 656 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 C1QTNF8P60827 252 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 BEX3Q00994 111 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 RUNX1T1Q06455 604 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 FAM214AQ32MH5 1076 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 BTBD8Q5XKL5 378 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 RAP1GAP2Q684P5 730 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 GLYATQ6IB77 296 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 AHSA2Q719I0 299 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PLEKHH3Q7Z736 793 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 MIB1Q86YT6 1006 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 FBXO39Q8N4B4 442 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CMASQ8NFW8 434 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 MAGED4Q96JG8 741 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 TNIP3Q96KP6 325 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 NUAK2Q9H093 628 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 SMURF2Q9HAU4 748 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 GOLGA2P5Q9HBQ8 144 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 RPRD1BQ9NQG5 326 aaKnown RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 COMMD8Q9NX08 183 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 AASSQ9UDR5 926 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PKP3Q9Y446 797 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ARIH1Q9Y4X5 557 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CITO14578 2027 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 C2CD4BA6NLJ0 364 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 BTN3A1O00481 513 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 IL18RAPO95256 599 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 MED26O95402 600 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CPSF4O95639 269 aaKnown RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PGK1P00558 417 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 RBP1P09455 135 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CYP2C9P11712 490 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 LBPP18428 481 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ICAM3P32942 547 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CAPGP40121 348 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ADCYAP1R1P41586 468 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ARPC4P59998 168 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 RHDQ02161 417 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 MRPL28Q13084 256 aaKnown RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 RNF111Q6ZNA4 994 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PIGZQ86VD9 579 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 VSIG10LQ86VR7 867 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 STX19Q8N4C7 294 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 METTL6Q8TCB7 284 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ASB9Q96DX5 294 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF670Q9BS34 389 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ULBP1Q9BZM6 244 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 FETUBQ9UGM5 382 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PCDHGA4Q9Y5G9 962 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 TTC24A2A3L6 582 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 OR51F1A6NGY5 319 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CENPXA8MT69 81 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 SCAMP3O14828 347 aaKnown RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 DHX15O43143 795 aaKnown RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 SEMA3DO95025 777 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 THRBP10828 461 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PRKCHP24723 683 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 AQP1P29972 269 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 FMO4P31512 558 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 DGKEP52429 567 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 PHC1P78364 1004 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 TRIM32Q13049 653 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 LDLRAD1Q5T700 205 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ADGRG6Q86SQ4 1221 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 EID3Q8N140 333 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CNTD1Q8N815 330 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CENPNQ96H22 339 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 KCNA7Q96RP8 456 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 CORO1BQ9BR76 489 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 DPEP3Q9H4B8 488 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF696Q9H7X3 374 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 SETD4Q9NVD3 440 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 MTRRQ9UBK8 725 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 RGPD3A6NKT7 1758 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-201ENST00000317716 RGPD4Q7Z3J3 1758 aa7.53□□□□□ -1.2
CDHR3-201ENST00000317716 NRXN2Q9P2S2 1712 aa7.52□□□□□ -1.2
CDHR3-201ENST00000317716 A0A0G2JLL6 359 aaPredicted RBP7.52□□□□□ -1.21
CDHR3-201ENST00000317716 BCLAF3A2AJT9 711 aaKnown RBP7.52□□□□□ -1.21
CDHR3-201ENST00000317716 BHMG1C9JSJ3 638 aaPredicted RBP7.52□□□□□ -1.21
CDHR3-201ENST00000317716 E7ESA3 106 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 DENRO43583 198 aaKnown RBP7.52□□□□□ -1.21
CDHR3-201ENST00000317716 FUCA1P04066 466 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 NTRK1P04629 796 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 EFNA1P20827 205 aaPredicted RBP7.52□□□□□ -1.21
CDHR3-201ENST00000317716 GTF2E2P29084 291 aaKnown RBP7.52□□□□□ -1.21
CDHR3-201ENST00000317716 NR2C2P49116 596 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 NDUFV1P49821 464 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 PRKCZQ05513 592 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 ZNF423Q2M1K9 1284 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 HSDL1Q3SXM5 330 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 PABPC1LQ4VXU2 614 aaKnown RBP7.52□□□□□ -1.21
CDHR3-201ENST00000317716 IL27RAQ6UWB1 636 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 DCDC5Q6ZRR9 648 aa7.52□□□□□ -1.21
CDHR3-201ENST00000317716 GPR142Q7Z601 462 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms