RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FBXO40Q9UH90 709 aa4.17□□□□□ -1.74
SMCO3-201ENST00000316048 IPO11Q9UI26 975 aaKnown RBP4.17□□□□□ -1.74
SMCO3-201ENST00000316048 NENFQ9UMX5 172 aa4.17□□□□□ -1.74
SMCO3-201ENST00000316048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.17□□□□□ -1.74
SMCO3-201ENST00000316048 PTRH2Q9Y3E5 179 aaKnown RBP4.17□□□□□ -1.74
SMCO3-201ENST00000316048 FAM169AQ9Y6X4 670 aa4.17□□□□□ -1.74
SMCO3-201ENST00000316048 MRC1P22897 1456 aa4.17□□□□□ -1.74
SMCO3-201ENST00000316048 TMEM247A6NEH6 219 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 LRRC3CA6NJW4 275 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 RHODO00212 210 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 ATP2C2O75185 946 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 TMCC1O94876 653 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 SELLP14151 372 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 CTPS1P17812 591 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 CDH2P19022 906 aaPredicted RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 TERF1P54274 439 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 NIPAL4Q0D2K0 466 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 TMEM266Q2M3C6 531 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 FAM133BQ5BKY9 247 aaKnown RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 PLEKHS1Q5SXH7 462 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 FAM47EQ6ZV65 393 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 HSCBQ8IWL3 235 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 SLC35F3Q8IY50 421 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 Q8N1X5 172 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 IL17RCQ8NAC3 791 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 TMEM170AQ8WVE7 144 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 DUSP26Q9BV47 211 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 KLHL4Q9C0H6 718 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 LHPPQ9H008 270 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 GOLGA2P5Q9HBQ8 144 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 SH3GLB2Q9NR46 395 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 PACSIN3Q9UKS6 424 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 LAMP3Q9UQV4 416 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 FAM96BQ9Y3D0 163 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 LSM4Q9Y4Z0 139 aaKnown RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 N4BP2Q86UW6 1770 aaPredicted RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 COL14A1Q05707 1796 aaKnown RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 FOXO6A8MYZ6 492 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 KLRF2D3W0D1 207 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 CTDSP2O14595 271 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 TP73O15350 636 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 SEC14L5O43304 696 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 DKC1O60832 514 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 RNF8O76064 485 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 IPO7O95373 1038 aaKnown RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 IGKV5-2P06315 115 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 PRR35P0CG20 571 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 SRD5A1P18405 259 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 TFEBP19484 476 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 CDAP32320 146 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 CIITAP33076 1130 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 MCM7P33993 719 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 CLCNKBP51801 687 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 GALCP54803 685 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 PROK1P58294 105 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 CAPSQ13938 189 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 CES5AQ6NT32 575 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 OLFML1Q6UWY5 402 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 ZNF782Q6ZMW2 699 aaPredicted RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 DDIASQ8IXT1 998 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 WIPF2Q8TF74 440 aaPredicted RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 SNX21Q969T3 373 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 JAKMIP2Q96AA8 810 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 SLC22A18Q96BI1 424 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 ZC3HAV1LQ96H79 300 aaKnown RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 IL1RAPL2Q9NP60 686 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 DDX4Q9NQI0 724 aaKnown RBP4.16□□□□□ -1.74
SMCO3-201ENST00000316048 PADI1Q9ULC6 663 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 TTC41PQ6P2S7 1318 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 ROBO1Q9Y6N7 1651 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 ABCA3Q99758 1704 aa4.16□□□□□ -1.74
SMCO3-201ENST00000316048 AHDC1Q5TGY3 1603 aaPredicted RBP4.15□□□□□ -1.74
SMCO3-201ENST00000316048 USP17L23D6RBM5 183 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 TAF4O00268 1085 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 UBE2CO00762 179 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 MATN3O15232 486 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 FOXN1O15353 648 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 UNGP13051 313 aaPredicted RBP4.15□□□□□ -1.74
SMCO3-201ENST00000316048 MCCP23508 829 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 YWHAQP27348 245 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 SLC15A1P46059 708 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 NRIP1P48552 1158 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 MRPL12P52815 198 aaKnown RBP4.15□□□□□ -1.74
SMCO3-201ENST00000316048 PMS2P54278 862 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 CDC16Q13042 620 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 ZNF268Q14587 947 aaPredicted RBP4.15□□□□□ -1.74
SMCO3-201ENST00000316048 HMBOX1Q6NT76 420 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 AAGABQ6PD74 315 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 ZNF66Q6ZN08 573 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 POC5Q8NA72 575 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 GJC3Q8NFK1 279 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 POMGNT1Q8WZA1 660 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 SH2D3AQ9BRG2 576 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 MXRA8Q9BRK3 442 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 PDZD7Q9H5P4 517 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 BICC1Q9H694 974 aaKnown RBP4.15□□□□□ -1.74
SMCO3-201ENST00000316048 RANGRFQ9HD47 186 aaPredicted RBP4.15□□□□□ -1.74
SMCO3-201ENST00000316048 ASAH2Q9NR71 780 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 DLGAP2Q9P1A6 1054 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms