RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 RGSL1A5PLK6 1076 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 GFRA2O00451 464 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 CCNT2O60583 730 aaKnown RBP19.05■□□□□ 0.64
CD55-201ENST00000314754 ITGB8P26012 769 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 MZF1P28698 734 aaPredicted RBP19.05■□□□□ 0.64
CD55-201ENST00000314754 KCNC1P48547 511 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 SATB1Q01826 763 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 FAM219BQ5XKK7 198 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 NXNQ6DKJ4 435 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 Q6ZNB5 142 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 KIRREL3Q8IZU9 778 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 ARL14EPQ8N8R7 260 aaPredicted RBP19.05■□□□□ 0.64
CD55-201ENST00000314754 ADAMTS19Q8TE59 1207 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.05■□□□□ 0.64
CD55-201ENST00000314754 VPS28Q9UK41 221 aa19.05■□□□□ 0.64
CD55-201ENST00000314754 TEX28O15482 410 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 TBX10O75333 385 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 LUC7L3O95232 432 aaKnown RBP19.04■□□□□ 0.64
CD55-201ENST00000314754 SPATA31D3P0C874 917 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 SLC34A1Q06495 639 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 PDAP1Q13442 181 aaKnown RBP19.04■□□□□ 0.64
CD55-201ENST00000314754 PTPRRQ15256 657 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 PGM2L1Q6PCE3 622 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 SPATA31D4Q6ZUB0 917 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 GPR65Q8IYL9 337 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 LPGAT1Q92604 370 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 TMA16Q96EY4 203 aaKnown RBP19.04■□□□□ 0.64
CD55-201ENST00000314754 ZBED2Q9BTP6 218 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 GSTO2Q9H4Y5 243 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 POLR3BQ9NW08 1133 aaPredicted RBP19.04■□□□□ 0.64
CD55-201ENST00000314754 LHX3Q9UBR4 397 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 LRRC42Q9Y546 428 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 OR51B4Q9Y5P0 310 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 DOCK6Q96HP0 2047 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 SDHDO14521 159 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 RPSAP08865 295 aaKnown RBP19.04■□□□□ 0.64
CD55-201ENST00000314754 HDCP19113 662 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 CDC25CP30307 473 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 WDR5P61964 334 aaKnown RBP19.04■□□□□ 0.64
CD55-201ENST00000314754 TRAF2Q12933 501 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 TMEM198Q66K66 360 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 TXNDC8Q6A555 127 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 NCEH1Q6PIU2 408 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 CUZD1Q86UP6 607 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 DEFB107AQ8IZN7 70 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 CEP70Q8NHQ1 597 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 RP9Q8TA86 221 aaKnown RBP19.04■□□□□ 0.64
CD55-201ENST00000314754 RHEBL1Q8TAI7 183 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 FAM136AQ96C01 138 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 CDH22Q9UJ99 828 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 SUFUQ9UMX1 484 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 VPS9D1Q9Y2B5 631 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 CPQQ9Y646 472 aa19.04■□□□□ 0.64
CD55-201ENST00000314754 UBA6A0AVT1 1052 aaPredicted RBP19.03■□□□□ 0.64
CD55-201ENST00000314754 SMIM24O75264 130 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 PPM1AP35813 382 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 ERFP50548 548 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 SESN3P58005 492 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 HERVK_113P63132 956 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 CDH18Q13634 790 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 ZRSR2Q15696 482 aaKnown RBP19.03■□□□□ 0.64
CD55-201ENST00000314754 ZNF678Q5SXM1 525 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 MYLK4Q86YV6 388 aaPredicted RBP19.03■□□□□ 0.64
CD55-201ENST00000314754 FAM217AQ8IXS0 508 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 TTC16Q8NEE8 873 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 ZNF570Q96NI8 536 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 CATSPER2Q96P56 530 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 ERVK-6Q9BXR3 956 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 CCDC68Q9H2F9 335 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 ZBTB26Q9HCK0 441 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 TAS2R13Q9NYV9 303 aa19.03■□□□□ 0.64
CD55-201ENST00000314754 A0A0U1RQS6 177 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 EFCAB14O75071 495 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 NDUFS3O75489 264 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 HERC3Q15034 1050 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 SNX32Q86XE0 403 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 DCAF4L2Q8NA75 395 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 DTX3LQ8TDB6 740 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 BHMTQ93088 406 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 MEAF6Q9HAF1 191 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 SYTL2Q9HCH5 934 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 TNFRSF12AQ9NP84 129 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 HACD3Q9P035 362 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 VPS51Q9UID3 782 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 G3BP2Q9UN86 482 aaKnown RBP19.02■□□□□ 0.64
CD55-201ENST00000314754 ASB3Q9Y575 518 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 VHLP40337 213 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 RHOAP61586 193 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 CREMQ03060 361 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 TBL3Q12788 808 aaKnown RBP19.02■□□□□ 0.64
CD55-201ENST00000314754 CYLC2Q14093 348 aaPredicted RBP19.02■□□□□ 0.64
CD55-201ENST00000314754 WFDC5Q8TCV5 224 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 ALG14Q96F25 216 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 TFB2MQ9H5Q4 396 aaKnown RBP19.02■□□□□ 0.64
CD55-201ENST00000314754 MRGBPQ9NV56 204 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 DNMT3BQ9UBC3 853 aaKnown RBP19.02■□□□□ 0.64
CD55-201ENST00000314754 MED16Q9Y2X0 877 aa19.02■□□□□ 0.64
CD55-201ENST00000314754 ANKRD12Q6UB98 2062 aa19.02■□□□□ 0.63
CD55-201ENST00000314754 LILRB3O75022 631 aa19.01■□□□□ 0.63
CD55-201ENST00000314754 SKAP2O75563 359 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms