RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ERVK-6Q9BXR3 956 aa25.33■■□□□ 1.65
HOXB3-201ENST00000311626 TMEM248Q9NWD8 314 aa25.33■■□□□ 1.65
HOXB3-201ENST00000311626 TMEM181Q9P2C4 612 aa25.33■■□□□ 1.65
HOXB3-201ENST00000311626 MAP10Q9P2G4 905 aa25.33■■□□□ 1.65
HOXB3-201ENST00000311626 SCN4AP35499 1836 aa25.33■■□□□ 1.65
HOXB3-201ENST00000311626 NCF1BA6NI72 391 aaPredicted RBP25.33■■□□□ 1.64
HOXB3-201ENST00000311626 SAC3D1A6NKF1 404 aa25.33■■□□□ 1.64
HOXB3-201ENST00000311626 NCF1CA8MVU1 366 aaPredicted RBP25.33■■□□□ 1.64
HOXB3-201ENST00000311626 GLP2RO95838 553 aa25.33■■□□□ 1.64
HOXB3-201ENST00000311626 ASGR1P07306 291 aa25.33■■□□□ 1.64
HOXB3-201ENST00000311626 NCF1P14598 390 aaPredicted RBP25.33■■□□□ 1.64
HOXB3-201ENST00000311626 C10orf120Q5SQS8 335 aa25.33■■□□□ 1.64
HOXB3-201ENST00000311626 CYP2S1Q96SQ9 504 aa25.33■■□□□ 1.64
HOXB3-201ENST00000311626 SCML2Q9UQR0 700 aa25.33■■□□□ 1.64
HOXB3-201ENST00000311626 SLC4A7Q9Y6M7 1214 aa25.33■■□□□ 1.64
HOXB3-201ENST00000311626 A0A0U1RQS6 177 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 SLC12A8A0AV02 714 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 OR1E1P30953 314 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 C17orf99Q6UX52 265 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 TMEM126BQ8IUX1 230 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 EXOC2Q96KP1 924 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 TUBB1Q9H4B7 451 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 SARDHQ9UL12 918 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 AURKCQ9UQB9 309 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 TIMM22Q9Y584 194 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 SCN10AQ9Y5Y9 1956 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 H3BSA7 217 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 RAMP2O60895 175 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 CAPN3P20807 821 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 CES1P23141 567 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 STX1BP61266 288 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 DHFR2Q86XF0 187 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 TTC16Q8NEE8 873 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 TWIST2Q8WVJ9 160 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 ESAMQ96AP7 390 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 TMEM79Q9BSE2 394 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 MRPS26Q9BYN8 205 aaKnown RBP25.32■■□□□ 1.64
HOXB3-201ENST00000311626 SLC2A11Q9BYW1 496 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 SEMA4BQ9NPR2 832 aaPredicted RBP25.32■■□□□ 1.64
HOXB3-201ENST00000311626 PCDHB8Q9UN66 801 aa25.32■■□□□ 1.64
HOXB3-201ENST00000311626 ARHGEF37A1IGU5 675 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 AKAP10O43572 662 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 GFAPP14136 432 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 FDXRP22570 491 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 SPPL2CQ8IUH8 684 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 CLYBLQ8N0X4 340 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 TMIGD2Q96BF3 282 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 L3HYPDHQ96EM0 354 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 ZNF696Q9H7X3 374 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 CAAP1Q9H8G2 361 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 A0A0D9SEW6 157 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 NME4O00746 187 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 PAPSS2O95340 614 aaPredicted RBP25.31■■□□□ 1.64
HOXB3-201ENST00000311626 CAPNS1P04632 268 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 MTHFD2P13995 350 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 FMO4P31512 558 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 PTPRRQ15256 657 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 MAP7D1Q3KQU3 841 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 FAM45BPQ6NSW5 357 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 RTN4RL1Q86UN2 441 aaPredicted RBP25.31■■□□□ 1.64
HOXB3-201ENST00000311626 LRRC49Q8IUZ0 686 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 FAM45AQ8TCE6 357 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 NSMCE3Q96MG7 304 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 GALPQ9UBC7 116 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 GABRQQ9UN88 632 aa25.31■■□□□ 1.64
HOXB3-201ENST00000311626 DOCK4Q8N1I0 1966 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 LOC285095A0A1B0GVY8 99 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 TCRBV3S1A0A5B6 114 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 SOCS2O14508 198 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 CDKN1CP49918 316 aaPredicted RBP25.3■■□□□ 1.64
HOXB3-201ENST00000311626 ZNF157P51786 506 aaPredicted RBP25.3■■□□□ 1.64
HOXB3-201ENST00000311626 KCNA10Q16322 511 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 MSANTD2Q6P1R3 559 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 TRIB2Q92519 343 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 FBXO32Q969P5 355 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 TUBGCP3Q96CW5 907 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.3■■□□□ 1.64
HOXB3-201ENST00000311626 PDLIM1O00151 329 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 TYMPP19971 482 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 PSMD8P48556 350 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 DYNC1I2Q13409 638 aaKnown RBP25.3■■□□□ 1.64
HOXB3-201ENST00000311626 SAMD4BQ5PRF9 694 aaKnown RBP25.3■■□□□ 1.64
HOXB3-201ENST00000311626 CHERPQ8IWX8 916 aaKnown RBP25.3■■□□□ 1.64
HOXB3-201ENST00000311626 DCBLD1Q8N8Z6 715 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 MARCH2Q9P0N8 246 aa25.3■■□□□ 1.64
HOXB3-201ENST00000311626 SUPT3HB4E1H0 165 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 SUPT3HO75486 399 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 PRDX3P30048 256 aaKnown RBP25.29■■□□□ 1.64
HOXB3-201ENST00000311626 CDH15P55291 814 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 TAF10Q12962 218 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 IRF5Q13568 498 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 PAQR3Q6TCH7 311 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 IFNEQ86WN2 208 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 TEX26Q8N6G2 289 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 GABPB2Q8TAK5 448 aaPredicted RBP25.29■■□□□ 1.64
HOXB3-201ENST00000311626 TSR3Q9UJK0 312 aaKnown RBP25.29■■□□□ 1.64
HOXB3-201ENST00000311626 AZIN1O14977 448 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 PCSK6P29122 969 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 SLC7A1P30825 629 aa25.29■■□□□ 1.64
HOXB3-201ENST00000311626 DIO3P55073 304 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms