RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 Q6ZSR6 202 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 ZNF534Q76KX8 674 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 TMC3Q7Z5M5 1100 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 ABI3BPQ7Z7G0 1075 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 SPATS2Q86XZ4 545 aaKnown RBP9.08□□□□□ -0.96
PDE4D-201ENST00000309641 JAMLQ86YT9 394 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 NDUFAF2Q8N183 169 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 CPT1BQ92523 772 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 LENG8Q96PV6 779 aaPredicted RBP9.08□□□□□ -0.96
PDE4D-201ENST00000309641 LGR4Q9BXB1 951 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 GPR63Q9BZJ6 419 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 ABCG8Q9H221 673 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 IL21RQ9HBE5 538 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 ANKRD6Q9Y2G4 727 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 FNDC3AQ9Y2H6 1198 aaKnown RBP9.08□□□□□ -0.96
PDE4D-201ENST00000309641 SNX11Q9Y5W9 270 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 MRFAP1Q9Y605 127 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 TMEM131Q92545 1883 aa9.08□□□□□ -0.96
PDE4D-201ENST00000309641 GOLGA8MH3BSY2 632 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 CCDC188H7C350 402 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 CCL22O00626 93 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 AVILO75366 819 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 SUN1O94901 812 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 SOD1P00441 154 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 THEGLP0DJG4 465 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ZNF30P17039 623 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 BPIP17213 487 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 CA5AP35218 305 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 LMAN1P49257 510 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 PFN3P60673 137 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 CRADDP78560 199 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 DR1Q01658 176 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 KCNJ11Q14654 390 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 POU6F1Q14863 301 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 PPP1R7Q15435 360 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 CCDC38Q502W7 563 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ALS2CLQ60I27 953 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 GLT6D1Q7Z4J2 308 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 PTAR1Q7Z6K3 402 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 MFSD2AQ8NA29 543 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 OR13C4Q8NGS5 318 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ASB12Q8WXK4 309 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 SLCO2A1Q92959 643 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 NUS1Q96E22 293 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ZNF778Q96MU6 729 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 RIOK2Q9BVS4 552 aaKnown RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 SLC6A14Q9UN76 642 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 SCN8AQ9UQD0 1980 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 GOLGA6CA6NDK9 693 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 GOLGA6BA6NDN3 693 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 TLR4O00206 839 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 PSMD11O00231 422 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 FPGTO14772 594 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 KHNYNO15037 678 aaKnown RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 VILLO15195 856 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 TP73O15350 636 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 RAD51CO43502 376 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 LDB2O43679 373 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 GAS8O95995 478 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 GOLGA6DP0CG33 693 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ENGP17813 658 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 HOXD12P35452 270 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 HMGCLP35914 325 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 TNNT3P45378 269 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 PTK6Q13882 451 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 CSRP2Q16527 193 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ZNF542PQ5EBM4 170 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ESRP1Q6NXG1 681 aaKnown RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ZNF572Q7Z3I7 529 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 TRIM74Q86UV6 250 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ALYREFQ86V81 257 aaKnown RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 DNAAF3Q8N9W5 541 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 DENND6BQ8NEG7 585 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 GRK7Q8WTQ7 553 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 PPP1R2P1Q96PQ5 205 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 TRIM31Q9BZY9 425 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 CASS4Q9NQ75 786 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 GOLGA6AQ9NYA3 693 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 IL17CQ9P0M4 197 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 SUSD2Q9UGT4 822 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 ASIC3Q9UHC3 531 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 FEZ2Q9UHY8 353 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-201ENST00000309641 HS3ST3A1Q9Y663 406 aa9.07□□□□□ -0.96
PDE4D-201ENST00000309641 TP53BP1Q12888 1972 aaPredicted RBP9.06□□□□□ -0.96
PDE4D-201ENST00000309641 TDRD6O60522 2096 aaKnown RBP9.06□□□□□ -0.96
PDE4D-201ENST00000309641 A6NNZ2 444 aa9.06□□□□□ -0.96
PDE4D-201ENST00000309641 ERI2A8K979 691 aaKnown RBP9.06□□□□□ -0.96
PDE4D-201ENST00000309641 FADS2P1A8MWK0 482 aa9.06□□□□□ -0.96
PDE4D-201ENST00000309641 KIF2AO00139 706 aaPredicted RBP9.06□□□□□ -0.96
PDE4D-201ENST00000309641 CDX4O14627 284 aaPredicted RBP9.06□□□□□ -0.96
PDE4D-201ENST00000309641 SCAMP1O15126 338 aa9.06□□□□□ -0.96
PDE4D-201ENST00000309641 NFKBIAP25963 317 aa9.06□□□□□ -0.96
PDE4D-201ENST00000309641 NUDT1P36639 197 aa9.06□□□□□ -0.96
PDE4D-201ENST00000309641 PLA2G5P39877 138 aa9.06□□□□□ -0.96
PDE4D-201ENST00000309641 ADCY8P40145 1251 aa9.06□□□□□ -0.96
PDE4D-201ENST00000309641 SESN2P58004 480 aaPredicted RBP9.06□□□□□ -0.96
PDE4D-201ENST00000309641 NXPH1P58417 271 aa9.06□□□□□ -0.96
PDE4D-201ENST00000309641 PDE1CQ14123 709 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms