RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 TBC1D19Q8N5T2 526 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 DCBLD1Q8N8Z6 715 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 S100ZQ8WXG8 99 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.19■□□□□ 0.59e-13■■■□□ 16.5
ATP2A2-201ENST00000308664 COL1A1P02452 1464 aaPredicted RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 TRIM43BA6NCK2 446 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 CILPO75339 1184 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 IPO13O94829 963 aaKnown RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 RPL17P18621 184 aaKnown RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 PRDX6P30041 224 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 RPS9P46781 194 aaKnown RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 ASRGL1Q7L266 308 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 PDSS2Q86YH6 399 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 FIBCD1Q8N539 461 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 HOPXQ9BPY8 73 aaPredicted RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 DUSP16Q9BY84 665 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 PIPSLA2A3N6 862 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 CHI3L1P36222 383 aaPredicted RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 ATXN1P54253 815 aaKnown RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 TP53BP2Q13625 1128 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 CA9Q16790 459 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 TRIQKQ629K1 86 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 OTOP3Q7RTS5 596 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 AHI1Q8N157 1196 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 TMEM132CQ8N3T6 1108 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 MYOCOSA0A1B0GUC4 107 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 H3BN98 237 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 TKTP29401 623 aaKnown RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 IL12AP29459 219 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 MAD2L1Q13257 205 aaPredicted RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 PABPC1LQ4VXU2 614 aaKnown RBP18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 GLYATQ6IB77 296 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 ANKS3Q6ZW76 656 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 HIPK1Q86Z02 1210 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 DPEP3Q9H4B8 488 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 ZDHHC6Q9H6R6 413 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 CATSPERZQ9NTU4 200 aa18.19■□□□□ 0.5
ATP2A2-201ENST00000308664 XYLBO75191 536 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 VNN1O95497 513 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 OGDHQ02218 1023 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 ALDH6A1Q02252 535 aaKnown RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 HSPA14Q0VDF9 509 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 SIM2Q14190 667 aaPredicted RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 OGFOD2Q6N063 350 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 RHBDF2Q6PJF5 856 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 KCTD8Q6ZWB6 473 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 SCLYQ96I15 445 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 TIMM22Q9Y584 194 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 PDLIM1O00151 329 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 TFECO14948 347 aaPredicted RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 ASLP04424 464 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 IMPDH2P12268 514 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 CAMK2GQ13555 558 aaPredicted RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 PTPRNQ16849 979 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 TMEM214Q6NUQ4 689 aaKnown RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 CCDC149Q6ZUS6 474 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 SLC24A5Q71RS6 500 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 ZNF567Q8N184 647 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 NAT16Q8N8M0 369 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 KCTD15Q96SI1 283 aaPredicted RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 FTHL17Q9BXU8 183 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 WDR12Q9GZL7 423 aaKnown RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 MYBPHLA2RUH7 354 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 KLHL33A6NCF5 533 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 CD3EAPO15446 510 aaKnown RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 ALDH4A1P30038 563 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 RPL38P63173 70 aaKnown RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 TRIP4Q15650 581 aaPredicted RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 TEX44Q53QW1 395 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 REP15Q6BDI9 236 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 ARMC6Q6NXE6 501 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 PAOXQ6QHF9 649 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 LDB1Q86U70 411 aaPredicted RBP18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 SKA1Q96BD8 255 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 C19orf60Q96EN9 201 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 MCRS1Q96EZ8 462 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 MED8Q96G25 268 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 PKP2Q99959 881 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 CEP290O15078 2479 aa18.18■□□□□ 0.5
ATP2A2-201ENST00000308664 NEMP2A6NFY4 417 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 C2CD4BA6NLJ0 364 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 IDO1P14902 403 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 LMO2P25791 158 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 ICAM3P32942 547 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 WNT3AP56704 352 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 ARMC12Q5T9G4 340 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 SIX5Q8N196 739 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 PROX1Q92786 737 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 CIDEBQ9UHD4 219 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 DNMT3LQ9UJW3 386 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 DNAJA2O60884 412 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 CXCL14O95715 111 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 NCK1P16333 377 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 AOC1P19801 751 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 GABRR2P28476 465 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 ADRA1BP35368 520 aa18.17■□□□□ 0.5
ATP2A2-201ENST00000308664 LILRA4P59901 499 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms