RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 RPL35P42766 123 aaKnown RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 SLC18A1P54219 525 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 TAP1Q03518 808 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 GBE1Q04446 702 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 CDK18Q07002 472 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 KLF10Q13118 480 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 KRR1Q13601 381 aaKnown RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 INPP5AQ14642 412 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 KCNJ11Q14654 390 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 EFCAB12Q6NXP0 572 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 SYCE2Q6PIF2 218 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 CCDC149Q6ZUS6 474 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 EFL1Q7Z2Z2 1120 aaKnown RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 PRRT2Q7Z6L0 340 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 CAND1Q86VP6 1230 aaKnown RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 PLD5Q8N7P1 536 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 PDPRQ8NCN5 879 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 MCFD2Q8NI22 146 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 ZNF420Q8TAQ5 688 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 PEX13Q92968 403 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 TMEM176AQ96HP8 235 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 NIFKQ9BYG3 293 aaKnown RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 ASPSCR1Q9BZE9 553 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 ZNF518BQ9C0D4 1074 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 PCDHAC1Q9H158 963 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 TMEM134Q9H6X4 195 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 ABI2Q9NYB9 513 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 ISPDA4D126 451 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 RNASEH2AO75792 299 aaKnown RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 WDR47O94967 919 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 VTNP04004 478 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 CXCR2P25025 360 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 TYK2P29597 1187 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 NME5P56597 212 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 COX10Q12887 443 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 OXA1LQ15070 435 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 IER5Q5VY09 327 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 FAM205BPQ63HN1 556 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 MPZL3Q6UWV2 235 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 ZPBP2Q6X784 338 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 KIAA0408Q6ZU52 694 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 BTLAQ7Z6A9 289 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 KBTBD6Q86V97 674 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 SLC26A11Q86WA9 606 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 CMASQ8NFW8 434 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 LILRB1Q8NHL6 650 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 NDRG1Q92597 394 aaKnown RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 NXNL1Q96CM4 212 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 TUBGCP3Q96CW5 907 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 MAGED4Q96JG8 741 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 TCF12Q99081 682 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 KCTD14Q9BQ13 255 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 MROQ9BYG7 248 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 C1orf21Q9H246 121 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-201ENST00000308259 ZNF112Q9UJU3 913 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 TSPAN16Q9UKR8 245 aa10.48□□□□□ -0.73
MSRB3-201ENST00000308259 MYO18AQ92614 2054 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CABYRO75952 493 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 STAG3L1P0CL83 205 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 POLR2CP19387 275 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 GPD1P21695 349 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PTPN7P35236 360 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 MXD4Q14582 209 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 COLEC12Q5KU26 742 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ZNF544Q6NX49 715 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 UNC5AQ6ZN44 842 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ACOT1Q86TX2 421 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 FAM109AQ8N4B1 249 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PCDH19Q8TAB3 1148 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ACDQ96AP0 544 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 YME1L1Q96TA2 773 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 TMPRSS4Q9NRS4 437 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ASNSD1Q9NWL6 643 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 THG1LQ9NWX6 298 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 NUDT5Q9UKK9 219 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 MICAL3Q7RTP6 2002 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 NUPL2O15504 423 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PDPK1O15530 556 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 HOXC11O43248 304 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 MED7O43513 233 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 HK2P52789 917 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PGGT1BP53609 377 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 SESN2P58004 480 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 CD83Q01151 205 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 ILF2Q12905 390 aaKnown RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 COL19A1Q14993 1142 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 NOMO1Q15155 1222 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 INAVAQ3KP66 663 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 LBX2Q6XYB7 198 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 SH2D5Q6ZV89 423 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 FEM1CQ96JP0 617 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 HSFY1Q96LI6 401 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 SAV1Q9H4B6 383 aaPredicted RBP10.47□□□□□ -0.73
MSRB3-201ENST00000308259 RSAD1Q9HA92 442 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PDGFCQ9NRA1 345 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 SPATA2Q9UM82 520 aa10.47□□□□□ -0.73
MSRB3-201ENST00000308259 PCDHGA7Q9Y5G6 932 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms