RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ZNF470Q6ECI4 717 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 FSTL4Q6MZW2 842 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 NEPROQ6NW34 567 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 MTSS1LQ765P7 747 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 LYSMD3Q7Z3D4 306 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 PTAR1Q7Z6K3 402 aaPredicted RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 LDB1Q86U70 411 aaPredicted RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 ZC3HC1Q86WB0 502 aaKnown RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 DCLK2Q8N568 766 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 OR6P1Q8NGX9 317 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 DENND1AQ8TEH3 1009 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 CDKN2AIPNLQ96HQ2 116 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 VPS39Q96JC1 886 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 FAM167BQ9BTA0 163 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 MAGEE1Q9HCI5 957 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 SSU72Q9NP77 194 aaKnown RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 CACNA2D2Q9NY47 1150 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 TXNDC16Q9P2K2 825 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 RPL26L1Q9UNX3 145 aaKnown RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 CAPN8A6NHC0 703 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 C2orf81A6NN90 581 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 C2CD4DB7Z1M9 353 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 TPP1O14773 563 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 LEFTY1O75610 366 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 HAUS5O94927 633 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 TOP3BO95985 862 aaKnown RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 LPOP22079 712 aaPredicted RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 NNMTP40261 264 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 EIF2DP41214 584 aaKnown RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 MAGEA12P43365 314 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 CSRP3P50461 194 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 PGGT1BP53609 377 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 WDR4P57081 412 aaKnown RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 PRAMEP78395 509 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 SEMG2Q02383 582 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 LAMB3Q13751 1172 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 ZNF234Q14588 700 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 GRM3Q14832 879 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 EIF4HQ15056 248 aaKnown RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 ITPRIPL2Q3MIP1 535 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 LRRC73Q5JTD7 316 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 FOXR1Q6PIV2 292 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 CDHR3Q6ZTQ4 885 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 CMC1Q7Z7K0 106 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 TSPAN33Q86UF1 283 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 CILP2Q8IUL8 1156 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 ISL2Q96A47 359 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 APOPT1Q96IL0 206 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 ZNF641Q96N77 438 aaPredicted RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 KLHL32Q96NJ5 620 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 GPR22Q99680 433 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 HEPHQ9BQS7 1158 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 RHOJQ9H4E5 214 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 CAB39LQ9H9S4 337 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 FBRSL1Q9HCM7 1045 aaKnown RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 BPIFA1Q9NP55 256 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 ZDHHC4Q9NPG8 344 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 FBXO6Q9NRD1 293 aaPredicted RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 PCMTD2Q9NV79 361 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 INTS9Q9NV88 658 aaKnown RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 NSMCE4AQ9NXX6 385 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 PSD3Q9NYI0 1048 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 HACD3Q9P035 362 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 IL17CQ9P0M4 197 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 SLC17A7Q9P2U7 560 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 FKBPLQ9UIM3 349 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 FBXO5Q9UKT4 447 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 GRID1Q9ULK0 1009 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 SMG5Q9UPR3 1016 aaKnown RBP6.96□□□□□ -1.29
PTCD2-201ENST00000308077 PPIL1Q9Y3C6 166 aa6.96□□□□□ -1.29
PTCD2-201ENST00000308077 ZFYVE26Q68DK2 2539 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 TBC1D3BA6NDS4 549 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 NPIPB15A6NHN6 443 aaPredicted RBP6.96□□□□□ -1.3
PTCD2-201ENST00000308077 A8MX80 341 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 MBTPS2O43462 519 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 KAT7O95251 611 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 CLDN7O95471 211 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 S1PR4O95977 384 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 PROS1P07225 676 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 KCNA5P22460 613 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 FOXN2P32314 431 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 LSP1P33241 339 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 RECQLP46063 649 aaPredicted RBP6.96□□□□□ -1.3
PTCD2-201ENST00000308077 LEPRP48357 1165 aaKnown RBP6.96□□□□□ -1.3
PTCD2-201ENST00000308077 SLC18A1P54219 525 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 ST8SIA6P61647 398 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 XIAPP98170 497 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 RAD51Q06609 339 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 DNAJC3Q13217 504 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 PEX6Q13608 980 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 PDE1CQ14123 709 aaPredicted RBP6.96□□□□□ -1.3
PTCD2-201ENST00000308077 FNDC3BQ53EP0 1204 aaKnown RBP6.96□□□□□ -1.3
PTCD2-201ENST00000308077 ARSIQ5FYB1 569 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 C9orf64Q5T6V5 341 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 CNSTQ6PJW8 725 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 GDPD4Q6W3E5 623 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 SPNS2Q8IVW8 549 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 GPR150Q8NGU9 434 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 OR4L1Q8NH43 312 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 GDAP1Q8TB36 358 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms