RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 STX4Q12846 297 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 PLPP4Q5VZY2 271 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 STYXQ8WUJ0 223 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 ASZ1Q8WWH4 475 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 C19orf60Q96EN9 201 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 POLR3HQ9Y535 204 aaPredicted RBP15.93■□□□□ 0.14
USP42-201ENST00000306177 DHRS12A0PJE2 317 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 C4BPBP20851 252 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 SMIM11AP58511 58 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 RAB14P61106 215 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 RAVER1Q8IY67 606 aaKnown RBP15.93■□□□□ 0.14
USP42-201ENST00000306177 UPF1Q92900 1129 aaKnown RBP eCLIP15.93■□□□□ 0.14
USP42-201ENST00000306177 SPACA7Q96KW9 195 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 SLC25A51Q9H1U9 297 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 ZSCAN32Q9NX65 697 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 KCTD5Q9NXV2 234 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 DAPK2Q9UIK4 370 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 COQ4Q9Y3A0 265 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 HNF4AP41235 474 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 GSTM5P46439 218 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 SEMA5AQ13591 1074 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 TAPT1Q6NXT6 567 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 TAC4Q86UU9 113 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 TCAIMQ8N3R3 496 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 POMGNT2Q8NAT1 580 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 REXO5Q96IC2 774 aaKnown RBP15.93■□□□□ 0.14
USP42-201ENST00000306177 SH3GL2Q99962 352 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 TMEM109Q9BVC6 243 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 SIX2Q9NPC8 291 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 PLK2Q9NYY3 685 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 POLR1DQ9Y2S0 133 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 KLRG2A4D1S0 409 aaPredicted RBP15.93■□□□□ 0.14
USP42-201ENST00000306177 OR6A2O95222 327 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 NR2F1P10589 423 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 PPIBP23284 216 aaKnown RBP15.93■□□□□ 0.14
USP42-201ENST00000306177 MPSTP25325 297 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 RGS1Q08116 209 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 COX10Q12887 443 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 SLC9A5Q14940 896 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 C16orf72Q14CZ0 275 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 AP5B1Q2VPB7 878 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 SPANXN2Q5MJ10 180 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 FUT10Q6P4F1 479 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 ABRAXAS1Q6UWZ7 409 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 PROSER1Q86XN7 944 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 FAM20CQ8IXL6 584 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 ZNF567Q8N184 647 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 NAT16Q8N8M0 369 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 SLITRK2Q9H156 845 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 GMPPBQ9Y5P6 360 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 MATN3O15232 486 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 ACSL4O60488 711 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 CDH4P55283 916 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 SLC35G1Q2M3R5 365 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 TRIM40Q6P9F5 258 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 DLK2Q6UY11 383 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 ARHGAP36Q6ZRI8 547 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 C16orf62Q7Z3J2 963 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 SPATA19Q7Z5L4 167 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 RERGQ96A58 199 aaPredicted RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 C7orf26Q96N11 449 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 FERD3LQ96RJ6 166 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 SLC27A6Q9Y2P4 619 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 A0A1W2PQ67 120 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 PIPSLA2A3N6 862 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 EFCAB10A6NFE3 127 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 PMM2O15305 246 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 CST1P01037 141 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 IFNA16P05015 189 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 ASPAP45381 313 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 PDK3Q15120 406 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 LSM12Q3MHD2 195 aaKnown RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 TCF12Q99081 682 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 HOPXQ9BPY8 73 aaPredicted RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 ADI1Q9BV57 179 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 TCAF1Q9Y4C2 921 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 ISM1B1AKI9 464 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 CACNB4O00305 520 aaPredicted RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 MAPKAPK2P49137 400 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 SLC7A2P52569 658 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 LIMK2P53671 638 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 SPIRE1Q08AE8 756 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 SLC1A5Q15758 541 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 QPCTQ16769 361 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 GPAT3Q53EU6 434 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 ANKRD22Q5VYY1 191 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 DRICH1Q6PGQ1 229 aaPredicted RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 CERS6Q6ZMG9 384 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 OR52L1Q8NGH7 329 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 LRRC37A3O60309 1634 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 KPNA4O00629 521 aaPredicted RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 PSMD7P51665 324 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 DAOAP59103 153 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 CACNG1Q06432 222 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 TRIM25Q14258 630 aaKnown RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 FASTKD3Q14CZ7 662 aaKnown RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 ZIK1Q3SY52 487 aaPredicted RBP15.92■□□□□ 0.14
USP42-201ENST00000306177 BROXQ5VW32 411 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 RFWD3Q6PCD5 774 aa15.92■□□□□ 0.14
USP42-201ENST00000306177 PYROXD2Q8N2H3 581 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms