RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ACSM2AQ08AH3 577 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ACSM2BQ68CK6 577 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TMC3Q7Z5M5 1100 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 LCN9Q8WX39 176 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 KLHDC7BQ96G42 594 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 MSANTD3Q96H12 275 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ZBP1Q9H171 429 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 OR2AG1Q9H205 316 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 GID8Q9NWU2 228 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 SH3BP4Q9P0V3 963 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 PRRC2BQ5JSZ5 2229 aaKnown RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 EDN1P05305 212 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TFEBP19484 476 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 DRD1P21728 446 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 MDH1P40925 334 aaKnown RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ATP6V0D1P61421 351 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TAF1AQ15573 450 aaPredicted RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 PGS1Q32NB8 556 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF783Q6ZMS7 281 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 UBE2R2Q712K3 238 aaPredicted RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 IFNEQ86WN2 208 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 CMASQ8NFW8 434 aaPredicted RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 LMO3Q8TAP4 145 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 PBX4Q9BYU1 374 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 FKBPLQ9UIM3 349 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 PSME2Q9UL46 239 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TMCO1Q9UM00 188 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 INVSQ9Y283 1065 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF711Q9Y462 761 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 DTNAQ9Y4J8 743 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 FAM170BA6NMN3 283 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TM9SF1O15321 606 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 MMP20O60882 483 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TULP3O75386 442 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 SEC24AO95486 1093 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 IFNA16P05015 189 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 DNAJC3Q13217 504 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 CRYMQ14894 314 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ATP6AP1LQ52LC2 224 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 DGKKQ5KSL6 1271 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 C1orf220Q5T0J3 134 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 SNX30Q5VWJ9 437 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 RTN4RL1Q86UN2 441 aaPredicted RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 SERPINA9Q86WD7 417 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 C17orf64Q86WR6 236 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TMEM130Q8N3G9 435 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 CCDC124Q96CT7 223 aaKnown RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 BBS4Q96RK4 519 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 NUSAP1Q9BXS6 441 aaKnown RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TRIT1Q9H3H1 467 aaKnown RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 CHRAC1Q9NRG0 131 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 POLG2Q9UHN1 485 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ADAM21Q9UKJ8 722 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 PSMD13Q9UNM6 376 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 DDX60LQ5H9U9 1706 aaKnown RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 KLHL2O95198 593 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TNFP01375 233 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 CXCL10P02778 98 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 VIPR1P32241 457 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 HNF4AP41235 474 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 PRKAA2P54646 552 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 RAB10P61026 200 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 CLDN10P78369 228 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 MAD2L1Q13257 205 aaPredicted RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 MUM1Q2TAK8 710 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 RALGPS1Q5JS13 557 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 ANKRD54Q6NXT1 300 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 DNAJC1Q96KC8 554 aaKnown RBP9.25□□□□□ -0.93
PTPRE-202ENST00000306042 FCRL5Q96RD9 977 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 SIRPGQ9P1W8 387 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 TCAF1Q9Y4C2 921 aa9.25□□□□□ -0.93
PTPRE-202ENST00000306042 SCN4AP35499 1836 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 TPP1O14773 563 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 SEC22BO75396 215 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 BANF1O75531 89 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 TSHRP16473 764 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 NCBP2-AS2Q69YL0 99 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 C14orf80Q86SX3 495 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 NLRP14Q86W24 1093 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 AMZ2Q86W34 360 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 TMEM25Q86YD3 366 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 SLC44A2Q8IWA5 706 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 FAM46DQ8NEK8 389 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 VN1R2Q8NFZ6 395 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ASB2Q96Q27 587 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 SLC2A13Q96QE2 648 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 RBBP8Q99708 897 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 FEM1AQ9BSK4 669 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 OSBPL6Q9BZF3 934 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 POMKQ9H5K3 350 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 DOCK1Q14185 1865 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ADAM12O43184 909 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 HLA-DQB2P05538 268 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ENO3P13929 434 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 MAGEA9P43362 315 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 GRIA4P48058 902 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 HNRNPH2P55795 449 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 PLIN5Q00G26 463 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ELAVL3Q14576 367 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ZBTB6Q15916 424 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms