RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ELP6Q0PNE2 266 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 SRSF5Q13243 272 aaKnown RBP9.47□□□□□ -0.89
RFX3-201ENST00000302303 HLTFQ14527 1009 aaKnown RBP eCLIP9.47□□□□□ -0.89
RFX3-201ENST00000302303 ANKRD20A4Q4UJ75 823 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 ARMC3Q5W041 872 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 ERAP2Q6P179 960 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 NEK5Q6P3R8 708 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 UNC5AQ6ZN44 842 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 GLT6D1Q7Z4J2 308 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 SLC41A1Q8IVJ1 513 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 ZBTB44Q8NCP5 570 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 FBXO36Q8NEA4 188 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 OR2T34Q8NGX1 318 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 STYXQ8WUJ0 223 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
RFX3-201ENST00000302303 SCAMP4Q969E2 229 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 CENPTQ96BT3 561 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 CDKN2AIPNLQ96HQ2 116 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 C9orf72Q96LT7 481 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 TBATAQ96M53 351 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 AGAP2Q99490 1192 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 ABCG8Q9H221 673 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 SUDS3Q9H7L9 328 aaPredicted RBP9.47□□□□□ -0.89
RFX3-201ENST00000302303 PREBQ9HCU5 417 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 SAYSD1Q9NPB0 183 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 IL26Q9NPH9 171 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 MOCS1Q9NZB8 636 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 CHMP2BQ9UQN3 213 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 NCKAP1Q9Y2A7 1128 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 ZNF318Q5VUA4 2279 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3DA0A087WVF3 549 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3IA0A087WXS9 549 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3EA0A087X179 549 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3KA0A087X1G2 549 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 MAGEB16A2A368 324 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3FA6NER0 549 aaPredicted RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 OR51F1A6NGY5 319 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3LB9A6J9 549 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 K7ESM1 405 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 PSMD11O00231 422 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 GPR39O43194 453 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 RNGTTO60942 597 aaKnown RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 SEMA4FO95754 770 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 PAK4O96013 591 aaPredicted RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3HP0C7X1 549 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 SP9P0CG40 484 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 PRSS56P0CW18 603 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 CYP2A6P11509 494 aaPredicted RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 OXTRP30559 389 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 SSTR1P30872 391 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 UAP1Q16222 522 aaPredicted RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 KYNUQ16719 465 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 WSCD2Q2TBF2 565 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 HENMT1Q5T8I9 393 aaKnown RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3GQ6DHY5 549 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3CQ6IPX1 549 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TRMT10BQ6PF06 316 aaKnown RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 CENPUQ71F23 418 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 CYP2U1Q7Z449 544 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 NLRP8Q86W28 1048 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 LONP2Q86WA8 852 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TRIM69Q86WT6 500 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 HORMAD1Q86X24 394 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 RAVER1Q8IY67 606 aaKnown RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 ZBED8Q8IZ13 594 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TBC1D3Q8IZP1 549 aaPredicted RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 NDUFAF2Q8N183 169 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 TP53I13Q8NBR0 393 aaPredicted RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 PLA2G15Q8NCC3 412 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 C1orf216Q8TAB5 229 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 GANCQ8TET4 914 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 ASB12Q8WXK4 309 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.46□□□□□ -0.89
RFX3-201ENST00000302303 KLK6Q92876 244 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 PEX13Q92968 403 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 HDAC10Q969S8 669 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 BIRC7Q96CA5 298 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 STAMBPL1Q96FJ0 436 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 DTD2Q96FN9 168 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 SGSM3Q96HU1 749 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 SRPK1Q96SB4 655 aaKnown RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 LRFN3Q9BTN0 628 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 GPR174Q9BXC1 333 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 GPR63Q9BZJ6 419 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 CDC42EP4Q9H3Q1 356 aaKnown RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 MBNL1Q9NR56 388 aaKnown RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 SMYD2Q9NRG4 433 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 NINJ2Q9NZG7 142 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 IL1RAPL1Q9NZN1 696 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 NFKBIL1Q9UBC1 381 aaPredicted RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 CD84Q9UIB8 345 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 CNOT6Q9ULM6 557 aaKnown RBP9.46□□□□□ -0.89
RFX3-201ENST00000302303 FAM169AQ9Y6X4 670 aa9.46□□□□□ -0.89
RFX3-201ENST00000302303 DMDP11532 3685 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 LAMA1P25391 3075 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 MYO15AQ9UKN7 3530 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 CCDC162PA2VCL2 907 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 FAM47DPA6NHR8 397 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 C2orf81A6NN90 581 aa9.46□□□□□ -0.9
RFX3-201ENST00000302303 METTL12A8MUP2 240 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms