RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 APOFQ13790 326 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 POLD3Q15054 466 aaPredicted RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 PFKFB4Q16877 469 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 VPS26BQ4G0F5 336 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 FAM45BPQ6NSW5 357 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 FAM45AQ8TCE6 357 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 TRIB2Q92519 343 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 MPP4Q96JB8 637 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 ZNF597Q96LX8 424 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 ZNF512Q96ME7 567 aaPredicted RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 UROC1Q96N76 676 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 SMIM14Q96QK8 99 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 MRPS26Q9BYN8 205 aaKnown RBP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.62□□□□□ -0.23
BCCIP-202ENST00000299130 NOD1Q9Y239 953 aa13.62□□□□□ -0.23
BCCIP-202ENST00000299130 A0A0J9YYE9 177 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 GLP2RO95838 553 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CKMT2P17540 419 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CAPN3P20807 821 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 SLC7A1P30825 629 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 HUNKP57058 714 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 TRAP1Q12931 704 aaKnown RBP13.61□□□□□ -0.23
BCCIP-202ENST00000299130 SERINC3Q13530 473 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CYTH1Q15438 398 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 KIF19Q2TAC6 998 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 PHYKPLQ8IUZ5 450 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CLYBLQ8N0X4 340 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 TRPC4APQ8TEL6 797 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CANT1Q8WVQ1 401 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 ARHGAP39Q9C0H5 1083 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 VCX3AQ9NNX9 186 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 FNIP2Q9P278 1114 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CNOT11Q9UKZ1 510 aaKnown RBP13.61□□□□□ -0.23
BCCIP-202ENST00000299130 BTRCQ9Y297 605 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 PLXNA3P51805 1871 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 TANC1Q9C0D5 1861 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 NME4O00746 187 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 LINC00032P0C843 101 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 ZNF37AP17032 561 aaPredicted RBP13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CALRP27797 417 aaKnown RBP13.61□□□□□ -0.23
BCCIP-202ENST00000299130 NFKB2Q00653 900 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 ACVR1Q04771 509 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CAPRIN1Q14444 709 aaKnown RBP13.61□□□□□ -0.23
BCCIP-202ENST00000299130 KCNA10Q16322 511 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 SETMARQ53H47 684 aaPredicted RBP13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CLLU1OSQ5K130 101 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 NADSYN1Q6IA69 706 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 CFAP52Q8N1V2 620 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 TWIST2Q8WVJ9 160 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 FATE1Q969F0 183 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 TOP1MTQ969P6 601 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 RPRD1AQ96P16 312 aaPredicted RBP13.61□□□□□ -0.23
BCCIP-202ENST00000299130 TRMOQ9BU70 441 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 GABRQQ9UN88 632 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 SLC27A5Q9Y2P5 690 aa13.61□□□□□ -0.23
BCCIP-202ENST00000299130 SLC12A8A0AV02 714 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 CCDC160A6NGH7 325 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 RAMP2O60895 175 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 PSMC3P17980 439 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 UGT1A6P19224 532 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 RPL10P27635 214 aaKnown RBP13.6□□□□□ -0.23
BCCIP-202ENST00000299130 OR1E1P30953 314 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 GRIA3P42263 894 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 OR1G1P47890 313 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 HSPA13P48723 471 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 APLP1P51693 650 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 ARPP19P56211 112 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 IL10RBQ08334 325 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 DYNC1I2Q13409 638 aaKnown RBP13.6□□□□□ -0.23
BCCIP-202ENST00000299130 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 SAMD4BQ5PRF9 694 aaKnown RBP13.6□□□□□ -0.23
BCCIP-202ENST00000299130 DHFR2Q86XF0 187 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 ATP6V0D2Q8N8Y2 350 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 GABPB2Q8TAK5 448 aaPredicted RBP13.6□□□□□ -0.23
BCCIP-202ENST00000299130 SOCS4Q8WXH5 440 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 BTN2A3PQ96KV6 586 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 ATOH8Q96SQ7 321 aa13.6□□□□□ -0.23
BCCIP-202ENST00000299130 GPATCH1Q9BRR8 931 aaKnown RBP13.6□□□□□ -0.23
BCCIP-202ENST00000299130 A0A0D9SEW6 157 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 SOCS2O14508 198 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 OAZ2O95190 189 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 PENKP01210 267 aaPredicted RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 SLC26A3P40879 764 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 ACADVLP49748 655 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 CREB5Q02930 508 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 GEN1Q17RS7 908 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 C10orf120Q5SQS8 335 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 HACD2Q6Y1H2 254 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 DUS3LQ96G46 650 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 C8orf48Q96LL4 319 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 UPF3AQ9H1J1 476 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 CRISPLD1Q9H336 500 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 MRPL40Q9NQ50 206 aaKnown RBP13.59□□□□□ -0.23
BCCIP-202ENST00000299130 NDUFA13Q9P0J0 144 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 MARCH2Q9P0N8 246 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 GALPQ9UBC7 116 aa13.59□□□□□ -0.23
BCCIP-202ENST00000299130 EGFL7Q9UHF1 273 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms