RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ADGRG2Q8IZP9 1017 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 FSTL5Q8N475 847 aaPredicted RBP14.25□□□□□ -0.13
C9orf3-202ENST00000297979 CELF5Q8N6W0 485 aaKnown RBP14.25□□□□□ -0.13
C9orf3-202ENST00000297979 NXNL1Q96CM4 212 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 SFXN1Q9H9B4 322 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 DNAJC6O75061 913 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 UBOX5O94941 541 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 CTPS1P17812 591 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 GKP32189 559 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 ARFIP2P53365 341 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 SULT2A1Q06520 285 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 DLG1Q12959 904 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 TMEM151AQ8N4L1 468 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 PAF1Q8N7H5 531 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 GPR78Q96P69 363 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 PBX4Q9BYU1 374 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 GPAMQ9HCL2 828 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 FKBPLQ9UIM3 349 aa14.25□□□□□ -0.13
C9orf3-202ENST00000297979 MYO1CO00159 1063 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 HGSO14964 777 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-202ENST00000297979 H2AFYO75367 372 aaKnown RBP14.24□□□□□ -0.13
C9orf3-202ENST00000297979 PAPLNO95428 1278 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 SERPINA4P29622 427 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 CDKN2DP55273 166 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 OR6Y1Q8NGX8 325 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 GDPD5Q8WTR4 605 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 LRRC37BQ96QE4 947 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 TMEM120AQ9BXJ8 343 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 GPR63Q9BZJ6 419 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 CEP44Q9C0F1 390 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 NKX2-4Q9H2Z4 354 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 KCNK13Q9HB14 408 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 SLC24A3Q9HC58 644 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 XPR1Q9UBH6 696 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 SLC12A4Q9UP95 1085 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 CHD9Q3L8U1 2897 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 ITM2AO43736 263 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 TRIM13O60858 407 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 ALPIP09923 528 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 SBK3P0C264 359 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 PRSS56P0CW18 603 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 MC4RP32245 332 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 ECT2LQ008S8 904 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 GALNTL6Q49A17 601 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 ZNF549Q6P9A3 640 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 LYSMD3Q7Z3D4 306 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 PCDH20Q8N6Y1 951 aaKnown RBP14.24□□□□□ -0.13
C9orf3-202ENST00000297979 TUBGCP5Q96RT8 1024 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 TCF12Q99081 682 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 SLC2A11Q9BYW1 496 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 MRPL46Q9H2W6 279 aaKnown RBP14.24□□□□□ -0.13
C9orf3-202ENST00000297979 BPIFA1Q9NP55 256 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 OXSMQ9NWU1 459 aa14.24□□□□□ -0.13
C9orf3-202ENST00000297979 A0A0J9YYE9 177 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 H7C0S8 307 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 TRBC1P01850 177 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 LTA4HP09960 611 aaKnown RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 FDXRP22570 491 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 WEE1P30291 646 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 HMGCLP35914 325 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 SCTRP47872 440 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 ABCE1P61221 599 aaKnown RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 CSHL1Q14406 222 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 FAM83EQ2M2I3 478 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 ACCSLQ4AC99 568 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 PPP2R2DQ66LE6 453 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 ADIPOR2Q86V24 386 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 AHI1Q8N157 1196 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 SPATA6LQ8N4H0 392 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 KIAA1958Q8N8K9 716 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 VN1R2Q8NFZ6 395 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 PPP4R1Q8TF05 950 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 HEXDCQ8WVB3 486 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 IL17CQ9P0M4 197 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 TARM1B6A8C7 271 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 ACTN3Q08043 901 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 MYLK3Q32MK0 819 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 AGAP9Q5VTM2 703 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 ERP27Q96DN0 273 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 LRRC3BQ96PB8 259 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 MRPL57Q9BQC6 102 aaKnown RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 MYLK2Q9H1R3 596 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 DUS2Q9NX74 493 aaKnown RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 KCNK4Q9NYG8 393 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 MARCOQ9UEW3 520 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 VPS9D1Q9Y2B5 631 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 C2orf16Q68DN1 1984 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 A0A0U1RQS6 177 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 TMEM114B3SHH9 223 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 NDUFS3O75489 264 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 FSBPO95073 299 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 WISP3O95389 354 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-202ENST00000297979 KITP10721 976 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 SLC26A3P40879 764 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 LIG3P49916 1009 aa14.23□□□□□ -0.13
C9orf3-202ENST00000297979 PRKAA2P54646 552 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms