RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 SH2D3CQ8N5H7 860 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 HMCESQ96FZ2 354 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 CCDC3Q9BQI4 270 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SLC39A3Q9BRY0 314 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ERP44Q9BS26 406 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 GSDMCQ9BYG8 508 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 PCED1AQ9H1Q7 454 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 VPS11Q9H270 941 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ZFYVE1Q9HBF4 777 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SGK2Q9HBY8 427 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 C20orf96Q9NUD7 363 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 INTS7Q9NVH2 962 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 ZNF69Q9UC07 566 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 BLOC1S6Q9UL45 172 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ARL2BPQ9Y2Y0 163 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 STON1Q9Y6Q2 735 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 PIPSLA2A3N6 862 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 RGSL1A5PLK6 1076 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 WNT9AO14904 365 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SLC31A1O15431 190 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SLC7A4O43246 635 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SRP72O76094 671 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 VIPP01282 170 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ALPIP09923 528 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 FCGR1AP12314 374 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ENO3P13929 434 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 CXCR2P25025 360 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 NUBP1P53384 320 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SEC13P55735 322 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 MGAT5Q09328 741 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SPARCL1Q14515 664 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 KPNB1Q14974 876 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 FAM83EQ2M2I3 478 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 TRMT5Q32P41 509 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 HNRNPA1L2Q32P51 320 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 RFX4Q33E94 735 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 AGAP9Q5VTM2 703 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SYPL2Q5VXT5 272 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 PDPK2PQ6A1A2 396 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 NEPROQ6NW34 567 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 NEK5Q6P3R8 708 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 CAPN12Q6ZSI9 719 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ZBED8Q8IZ13 594 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 RBFAQ8N0V3 343 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 FSTL5Q8N475 847 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 PNPT1Q8TCS8 783 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 ADAMTS19Q8TE59 1207 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 CHAC2Q8WUX2 184 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 UBE2E3Q969T4 207 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 CCDC124Q96CT7 223 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 THAP11Q96EK4 314 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SH3GL2Q99962 352 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SELENOSQ9BQE4 189 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 BCL7BQ9BQE9 202 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ARHGAP9Q9BRR9 750 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 TTYH3Q9C0H2 523 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SLC39A8Q9C0K1 460 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SDCBP2Q9H190 292 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ASB8Q9H765 288 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SIX2Q9NPC8 291 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 SMYD2Q9NRG4 433 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 PIGVQ9NUD9 493 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 TMEM248Q9NWD8 314 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 HMGXB4Q9UGU5 601 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ANGPTL2Q9UKU9 493 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 CARD8Q9Y2G2 431 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 NEU2Q9Y3R4 380 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 RAI2Q9Y5P3 530 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 TTC3P53804 2025 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 LTBP1Q14766 1721 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 TMEM247A6NEH6 219 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 UPK3BL1B0FP48 263 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 UPK3BL2E5RIL1 263 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 F5H423 210 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 TOR1BO14657 336 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 EPHB6O15197 1021 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ADAM12O43184 909 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 HOXC11O43248 304 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 SHOX2O60902 331 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 EDN1P05305 212 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 PDHA1P08559 390 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ERVK-10P10266 1014 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 CYP2A7P20853 494 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ARPC4P59998 168 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 STX1BP61266 288 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 HNRNPKP61978 463 aaKnown RBP eCLIP3.11□□□□□ -1.91
HDX-201ENST00000297977 AP2B1P63010 937 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 NRG1Q02297 640 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 RPL6Q02878 288 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 SLC14A2Q15849 920 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 ZC3H12BQ5HYM0 836 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 FAXCQ5TGI0 409 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 KIAA1161Q6NSJ0 714 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 AFTPHQ6ULP2 937 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 FAM92BQ6ZTR7 304 aa3.11□□□□□ -1.91
HDX-201ENST00000297977 PTAR1Q7Z6K3 402 aaPredicted RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 MMAAQ8IVH4 418 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 TXNDC5Q8NBS9 432 aaKnown RBP3.11□□□□□ -1.91
HDX-201ENST00000297977 SVIPQ8NHG7 77 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms