RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 POLR3BQ9NW08 1133 aaPredicted RBP6.6□□□□□ -1.35
DEFB1-201ENST00000297439 CACNA2D2Q9NY47 1150 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
DEFB1-201ENST00000297439 ABCD2Q9UBJ2 740 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 CD300AQ9UGN4 299 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 SEPT3Q9UH03 358 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 STOML2Q9UJZ1 356 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 GABRQQ9UN88 632 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 TRAF6Q9Y4K3 522 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 PCDHGA7Q9Y5G6 932 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 SHROOM3Q8TF72 1996 aa6.6□□□□□ -1.35
DEFB1-201ENST00000297439 GOLGB1Q14789 3259 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 COL4A6Q14031 1691 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TCRBV3S1A0A5B6 114 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ILVBLA1L0T0 632 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TYW5A2RUC4 315 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TMEM88BA6NKF7 163 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 SYCE1LA8MT33 242 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 F5H5T6 163 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 H3BNC9 293 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 NEMP1O14524 444 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PFDN6O15212 129 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 CD3EAPO15446 510 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ST8SIA5O15466 376 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 KDELR3O43731 214 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 NRP2O60462 931 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ACSL4O60488 711 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 RNASEH1O60930 286 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 KERAO60938 352 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 CLDN11O75508 207 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 CNTN5O94779 1100 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 MOCS2O96007 188 aaPredicted RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 GNRH1P01148 92 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 RPS17P08708 135 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 OR4Q2P0C623 313 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PRR35P0CG20 571 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 MTHFD2P13995 350 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PCSK2P16519 638 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 XRCC1P18887 633 aaPredicted RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 SAT1P21673 171 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 KCNA5P22460 613 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 OR1E1P30953 314 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 DPP6P42658 865 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 OR1G1P47890 313 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ALDH1A3P47895 512 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PPP3CCP48454 512 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 SLC11A2P49281 568 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ZNF140P52738 457 aaPredicted RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 CHN2P52757 468 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 CDKN2DP55273 166 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 C1QTNF8P60827 252 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 STX1BP61266 288 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PSME3P61289 254 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TIAL1Q01085 375 aaKnown RBP eCLIP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ROR2Q01974 943 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 GNA12Q03113 381 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PRKCZQ05513 592 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 EFEMP1Q12805 493 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TAF10Q12962 218 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 BNIP2Q12982 314 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 FASTKQ14296 549 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ZNF460Q14592 562 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TAF1AQ15573 450 aaPredicted RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 SMAD1Q15797 465 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ADRM1Q16186 407 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 DDR2Q16832 855 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 MMEL1Q495T6 779 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 LIN52Q52LA3 116 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 SFT2D3Q587I9 215 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ZNF789Q5FWF6 425 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PPM1LQ5SGD2 360 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 C10orf120Q5SQS8 335 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 KANK2Q63ZY3 851 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TMEM198Q66K66 360 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 RAP1GAP2Q684P5 730 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 SLC8B1Q6J4K2 584 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 METTL2BQ6P1Q9 378 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ZNF549Q6P9A3 640 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 UGT2A3Q6UWM9 527 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TMEM207Q6UWW9 146 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PRR23BQ6ZRT6 265 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 GALNT13Q8IUC8 556 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PHYKPLQ8IUZ5 450 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 RNF168Q8IYW5 571 aaPredicted RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 CRIPAKQ8N1N5 446 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 NKAPQ8N5F7 415 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 MINDY1Q8N5J2 469 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PACRGLQ8N7B6 248 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 TMEM102Q8N9M5 508 aaPredicted RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 PCYOX1LQ8NBM8 494 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 OR4L1Q8NH43 312 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 SHKBP1Q8TBC3 707 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 STAG3L4Q8TBR4 150 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ANKRD49Q8WVL7 239 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 LPGAT1Q92604 370 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 HDAC10Q969S8 669 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 ZUFSPQ96AP4 578 aa6.59□□□□□ -1.35
DEFB1-201ENST00000297439 CCDC124Q96CT7 223 aaKnown RBP6.59□□□□□ -1.35
DEFB1-201ENST00000297439 C19orf60Q96EN9 201 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms