RNA–Protein interactions for RNA: ENST00000297261.6

SHH-201, Transcript of sonic hedgehog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHH, Length 4,454 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-201ENST00000297261 SERPINH1P50454 418 aaKnown RBP15.37■□□□□ 0.05
SHH-201ENST00000297261 DGKKQ5KSL6 1271 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 C10orf120Q5SQS8 335 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 CD99L2Q8TCZ2 262 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 DENND1AQ8TEH3 1009 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 EMID1Q96A84 441 aaPredicted RBP15.37■□□□□ 0.05
SHH-201ENST00000297261 MUC3BQ9H195 1237 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 ELOVL6Q9H5J4 265 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 POPDC2Q9HBU9 364 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 TRMT13Q9NUP7 481 aaKnown RBP15.37■□□□□ 0.05
SHH-201ENST00000297261 ADAMTS6Q9UKP5 1117 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 PIPSLA2A3N6 862 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 AZIN1O14977 448 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 TOP3AQ13472 1001 aaPredicted RBP15.37■□□□□ 0.05
SHH-201ENST00000297261 SIM2Q14190 667 aaPredicted RBP15.37■□□□□ 0.05
SHH-201ENST00000297261 CDHR3Q6ZTQ4 885 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 HIPK1Q86Z02 1210 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 ZDHHC14Q8IZN3 488 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 HS6ST3Q8IZP7 471 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 CAPNS2Q96L46 248 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 LPIN3Q9BQK8 851 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 GIT1Q9Y2X7 761 aa15.37■□□□□ 0.05
SHH-201ENST00000297261 FMO4P31512 558 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 NOS2P35228 1153 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 LIMK2P53671 638 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 PDCD4Q53EL6 469 aaKnown RBP15.36■□□□□ 0.05
SHH-201ENST00000297261 TRIQKQ629K1 86 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 PLEKHM3Q6ZWE6 761 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 DQX1Q8TE96 717 aaKnown RBP15.36■□□□□ 0.05
SHH-201ENST00000297261 AGAP2Q99490 1192 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 SPATA2Q9UM82 520 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 SMCHD1A6NHR9 2005 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 SOCS7O14512 581 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 RECQL5O94762 991 aaPredicted RBP15.36■□□□□ 0.05
SHH-201ENST00000297261 RENBPP51606 427 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 GATAD2AQ86YP4 633 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 TOP6BLQ8N6T0 577 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 CENPNQ96H22 339 aaPredicted RBP15.36■□□□□ 0.05
SHH-201ENST00000297261 RPRD1BQ9NQG5 326 aaKnown RBP15.36■□□□□ 0.05
SHH-201ENST00000297261 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHH-201ENST00000297261 BCLAF3A2AJT9 711 aaKnown RBP15.36■□□□□ 0.05
SHH-201ENST00000297261 EI24O14681 340 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 NCK1P16333 377 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 LMO2P25791 158 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 LILRA4P59901 499 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 SLC18A2Q05940 514 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 VEPH1Q14D04 833 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 MAPKAPK3Q16644 382 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 FAM171A1Q5VUB5 890 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 PKN3Q6P5Z2 889 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 THAP5Q7Z6K1 395 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 IGDCC3Q8IVU1 814 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 ASB2Q96Q27 587 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 KRT84Q9NSB2 600 aa15.36■□□□□ 0.05
SHH-201ENST00000297261 KLF11O14901 512 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 OAS1P00973 400 aaKnown RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 ALDH2P05091 517 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 NRG1Q02297 640 aaPredicted RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 NCF4Q15080 339 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 NFE2Q16621 373 aaPredicted RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 PLEKHG4Q58EX7 1191 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 UGT3A1Q6NUS8 523 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 PCDH19Q8TAB3 1148 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 FBXO32Q969P5 355 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 PTPN18Q99952 460 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 SLC39A3Q9BRY0 314 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 CINPQ9BW66 212 aaPredicted RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 SENP6Q9GZR1 1112 aaPredicted RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 C1orf21Q9H246 121 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 ZFP14Q9HCL3 533 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 KANSL3Q9P2N6 904 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 DKK3Q9UBP4 350 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 DNAJB2P25686 324 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 SLC39A12Q504Y0 691 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 FBXO48Q5FWF7 155 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 ZNF621Q6ZSS3 439 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 FSTL5Q8N475 847 aaPredicted RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 NAT16Q8N8M0 369 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 ZFP28Q8NHY6 868 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 NDRG1Q92597 394 aaKnown RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 C12orf43Q96C57 262 aaKnown RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 HOPXQ9BPY8 73 aaPredicted RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 CLPBQ9H078 707 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 REEP1Q9H902 201 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 RASSF1Q9NS23 344 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 SFMBT1Q9UHJ3 866 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 MAGEB3O15480 346 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 KCNH1O95259 989 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 MLNP12872 115 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 ADSLP30566 484 aaPredicted RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 C1DQ13901 141 aaKnown RBP15.35■□□□□ 0.05
SHH-201ENST00000297261 ZNF460Q14592 562 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 TLR1Q15399 786 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 REP15Q6BDI9 236 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 GLYATQ6IB77 296 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 DENND5AQ6IQ26 1287 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 ZNF280DQ6N043 979 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 FBXO27Q8NI29 283 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 NRG4Q8WWG1 115 aa15.35■□□□□ 0.05
SHH-201ENST00000297261 PNPLA8Q9NP80 782 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms